Gene SeD_B0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0052 
Symbol 
ID6870896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp28866 
End bp29663 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content62% 
IMG OID642783200 
Productminor fimbrial subunit 
Protein accessionYP_002213894 
Protein GI198241651 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA CGCATCATTA TAAATCTATT ATTTCCGCCC TGGCCGCGCT GGCCCTGTTT 
TATTCCGCAG CACCCCGGGC CGGAATTCTT GACGGCGGGG AAATACAGTT TCACGGTCTG 
GTCACTGACG AGGCTCCGAA ATGGACCTGG CAGGTGGGCT CCCCTGACCA GACATGGGCG 
GTGGATACCG CTGATGCCCG TACAGCGAAC GGACAACTGG TTTTTGATTT ACGCGGCAAG 
GGCTCCCTGC CGTTTCTGGA AGGCCATCTG TATGAGGTGG CAGAGCGCGG TGGTCCCGGC 
TTCACCCCTT TTATCTCCTT CAGCAGTAAC GGGCAGCCGT TTTCCGTGAC GGATGGCGGC 
AGCACGACGG CGCAACACTT CCGCGCCTCT GTCCCGGTAC GTAACCCGGA GAACGGTCAC 
GTGGCGGGAC AGCTTTCTTT CACCCTTGAC CAGGGAATGG CCGTCAGCGC CGGACACCAG 
GAAGACGGGG CGGTTCTGCC GGCAGGCATG TCGCTCGTAA ACGGGCAGAG CGTGAGCGGT 
GTGCAGGCCG GCACCCTGCC GCAGTGGCTC AAAAGCCGTC TGCCTTCCCT GCTGATGCTG 
AACCGGGGCT TCGGTAACGG AATGAGCACG GCAGATAACG GTCAGGTTAT CAGTCAGGGC 
GTGCTGGCTG ACGGCCGGGT GACCCGGCTG GCGGCGGCCT ATGCGTCCGC CGTCTCGGAT 
TTTGAGCTGC GCCTGCCGGC AGAAAACACG CCGGCGCAGT GGCAGGCCGG GCTGAGTGTG 
ACGGTGACGG TCCAGTAA
 
Protein sequence
MKITHHYKSI ISALAALALF YSAAPRAGIL DGGEIQFHGL VTDEAPKWTW QVGSPDQTWA 
VDTADARTAN GQLVFDLRGK GSLPFLEGHL YEVAERGGPG FTPFISFSSN GQPFSVTDGG 
STTAQHFRAS VPVRNPENGH VAGQLSFTLD QGMAVSAGHQ EDGAVLPAGM SLVNGQSVSG 
VQAGTLPQWL KSRLPSLLML NRGFGNGMST ADNGQVISQG VLADGRVTRL AAAYASAVSD 
FELRLPAENT PAQWQAGLSV TVTVQ