Gene SeD_B0051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0051 
Symbol 
ID6870835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp28074 
End bp28838 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content64% 
IMG OID642783199 
Productminor fimbrial subunit 
Protein accessionYP_002213893 
Protein GI198241700 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones105 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA TGACGATTTT ACTGCTGGCC GCCAGTCTGC TGCCGTCCTG TGTGCTGGCG 
TGGAACACGC CGGGGGAAGA CTTCAGCGGA GAGCTGAAGC TGGGCGGGCC GGTGACCAGC 
ACCCGTAATC CCTGGGTCTG GAAGGTCGGG GAAGGGAACA CACAGATAAA CACGAAAGCT 
GTCTCTGTCC TGCGCAGTGG GGAGCAGGTA ATACCGGTTC CCCTGCCGGC CATGACGGTC 
CTGCTGGGAA AAACTATCCT GACCACCCCG GCCGGCCGGG AGGGGCTTGC GCCGCAGGTG 
ACGTACGGTA AGGAAACCGA GGGTTTTGCA CTGACGTGGA CGGCGCCGGG TACGGCATCG 
GTGACACTGC CGGTGACGGG GGAGGGAAAT GTCCGTACCG GGACATTCAC CTTCCGGATG 
CAGGCGGCGG GTGTGCTGCG CCATGTCCTG GGGGACCGGG CGGAGTATGC CGGGCTGTAT 
GGCGACCTGC AGGGCAACGG CTTGCCGCCA CAGACGCAGG TGATGCCGGC AGGGCAGACG 
CCGGGTGTGC TGCAGACCCT GTTTGACAGT GAAGGCCCGG TCTGGCTCCG GAAGATGACG 
GTCAGCAGCG TGTCCGGACT GAGCCGGTTC AGTGACGCCG CCCTGCGCCA GGTTGACGGG 
GTATACGGCG CACAGACGGT GGCGGACAGC GGTGAGCTGC GTTTTAAGGG GGCGGTACCG 
TCCCGCTGGC ATACCTCCCT GGCGGTGAGC ATTGAATATC GGTAA
 
Protein sequence
MKRMTILLLA ASLLPSCVLA WNTPGEDFSG ELKLGGPVTS TRNPWVWKVG EGNTQINTKA 
VSVLRSGEQV IPVPLPAMTV LLGKTILTTP AGREGLAPQV TYGKETEGFA LTWTAPGTAS 
VTLPVTGEGN VRTGTFTFRM QAAGVLRHVL GDRAEYAGLY GDLQGNGLPP QTQVMPAGQT 
PGVLQTLFDS EGPVWLRKMT VSSVSGLSRF SDAALRQVDG VYGAQTVADS GELRFKGAVP 
SRWHTSLAVS IEYR