Gene SeD_B0044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0044 
Symbol 
ID6870867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp24809 
End bp25657 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content58% 
IMG OID642783192 
ProductSrgB 
Protein accessionYP_002213886 
Protein GI198241671 
COG category[S] Function unknown 
COG ID[COG3204] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones99 
Fosmid unclonability p-value0.880775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCTGA GACGTTTACT TAAACAAAAA CCGGCACTGC TGGCTGGCGC TCTTCTGATG 
GTGGCCGGTG CGGCCACACT GTATTTTCCG GAAACCTGGT ACCCGGAGGA AACGCAGTGG 
CAGCTTGCGA CAGAAAAAGA CATTCCCGGT ATACAGGGCG GTCTCTCCGG CCTGACGTGG 
AACCCGGACA GCGGAACGCT GTTTGCCGTG ACCGACCATC CGTCGTCGGT GGTGGAGCTG 
GACACGGACG GGAACGTGCT GCGGGTGATA CCATCGGATG GCGACCATGA TTTTGAGGCC 
ATTGAGTATC TCGGCCGGAA CCGCTATGTC CTGTCCCGGG AACGGGAGCG GATACTCACC 
ACCCACCACA TTGACAGGAA TACGTCTGTC CTGCCGCCGG CGTCATACAC CCTGACCCTG 
GATGTGGACA GAAAAAGCGA CAATGCCGGT TTTGAAGGCC TTGCCCGTGG ACGGGGAGAG 
AATGCCCTGA TAGTGGCGCA GGAAAAGAAA CCGCTTCGTT TTTTAGAAAC GGACCACAGC 
CATGACTCTC TGTCGGTCAG TGATTCACTG ACGCACCGGT TGTCCCTGCC GTGGTTCCTG 
AAGGATATCT CCGGCCTGCA TTACGACAGG AAAAACAGGC GGCTGTATGT GCTTTCCCAT 
GAATCAGCCC TGGTACTGGT GTCAGACCCC GAGGGCGGCT GGTGGGTGAT GCCGCTGCGC 
CGGGGACACA GTGGTCTGGA GCGGGACATT CCGCAGGCGG AAGGGATAGC TTCTGATGGC 
CGGAATTCGC TGTGGATAGT CAGTGAGCCA GACCGGTTTT ACCGCTTCAG CCGGACAACG 
ACGTCATGA
 
Protein sequence
MTLRRLLKQK PALLAGALLM VAGAATLYFP ETWYPEETQW QLATEKDIPG IQGGLSGLTW 
NPDSGTLFAV TDHPSSVVEL DTDGNVLRVI PSDGDHDFEA IEYLGRNRYV LSRERERILT 
THHIDRNTSV LPPASYTLTL DVDRKSDNAG FEGLARGRGE NALIVAQEKK PLRFLETDHS 
HDSLSVSDSL THRLSLPWFL KDISGLHYDR KNRRLYVLSH ESALVLVSDP EGGWWVMPLR 
RGHSGLERDI PQAEGIASDG RNSLWIVSEP DRFYRFSRTT TS