Gene SeD_B0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0027 
Symbol 
ID6870843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp17433 
End bp17858 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content49% 
IMG OID642783178 
Producttransposase 
Protein accessionYP_002213872 
Protein GI198241738 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones102 
Fosmid unclonability p-value0.922302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAATC ACCACGAATC ACTGGAAGGC TTTCTTCGTA AACGGCATAG TGTAAGTAAG 
CTGGTTGTGC ATTTAATCTT TACGACAAAA TACCGCTGCA AGCTGTTTGA CGGGCAGATT 
ATCGCTCAGT TACGTGATGC TTTTGGTTCG GCTGCGGCAA AGTTGGAGTG CGAAATTATC 
GAGATGGATG GTGAACAAGA TCACGTCCAT CTGCTGATAG CGTATCCGCT AAAACTGGGG 
GTCAGCGTGA TGGTAAATAA TTTAAAGTCG GTATCGTCGC GGCTTCTCCG TCAGCAGAAT 
ACCCACTTGC GGATGCAGAG CAAAACCGGG CTGCTGTGGT CTCGTTCTTA CTTTGCCTGT 
AGCGCCGGTG GTGCCACGAT AGAAACGCTT AAAGCATACG TGCTCAGACA GAATACGCCG 
GAGTAG
 
Protein sequence
MSNHHESLEG FLRKRHSVSK LVVHLIFTTK YRCKLFDGQI IAQLRDAFGS AAAKLECEII 
EMDGEQDHVH LLIAYPLKLG VSVMVNNLKS VSSRLLRQQN THLRMQSKTG LLWSRSYFAC 
SAGGATIETL KAYVLRQNTP E