Gene SeD_B0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0024 
Symbol 
ID6870841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand+ 
Start bp15808 
End bp16395 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content47% 
IMG OID642783175 
Productphosphothreonine lyase OspF 
Protein accessionYP_002213869 
Protein GI198241705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.942338 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTAT CCCACTTTAA AGAGGCGCTG GATGTGCCTG ACTATTCAGG GATGCGCCAG 
AGTGGTTTCT TTGCTATGAG CCAAGGTTTT CAGCTGAATA ACCATGGTTA CGATGTTTTC 
ATCCATGCTC GTCGAGAATC ACCTCAGTCT CAGGGCAAAT TTGCCGGTGA CAAGTTCCAC 
ATCAGTGTGC TCAGGGATAT GGTGCCACAA GCATTTCAAG CGCTGTCCGG ATTGCTGTTT 
TCAGAGGACA GTCCGGTAGA TAAGTGGAAA GTGACCGATA TGGAGAAGGT CGTTCAACAA 
GCCCGTGTTA GCCTGGGCGC TCAGTTCACG TTGTATATAA AACCAGACCA GGAAAATTCG 
CAGTACAGTG CGTCGTTTCT CCACAAGACA CGGCAATTTA TAGAGTGTCT GGAATCCAGA 
CTATCCGAAA ATGGGGTTAT TTCAGGACAG TGTCCTGAGT CAGACGTTCA TCCTGAAAAT 
TGGAAATATC TCAGTTATCG TAATGAACTA CGAAGTGGGC GTGATGGTGG TGAAATGCAG 
AGACAGGCTT TACGTGAGGA ACCGTTTTAT CGTTTGATGA CAGAGTAA
 
Protein sequence
MPVSHFKEAL DVPDYSGMRQ SGFFAMSQGF QLNNHGYDVF IHARRESPQS QGKFAGDKFH 
ISVLRDMVPQ AFQALSGLLF SEDSPVDKWK VTDMEKVVQQ ARVSLGAQFT LYIKPDQENS 
QYSASFLHKT RQFIECLESR LSENGVISGQ CPESDVHPEN WKYLSYRNEL RSGRDGGEMQ 
RQALREEPFY RLMTE