Gene SeD_B0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeD_B0004 
Symbol 
ID6870876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Dublin str. CT_02021853 
KingdomBacteria 
Replicon accessionNC_011204 
Strand- 
Start bp1770 
End bp2171 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content52% 
IMG OID642783160 
Producthypothetical protein 
Protein accessionYP_002213854 
Protein GI198241690 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.104268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value0.622068 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAGC ATAACGCTGC TCTCTGGCTG GTCAGACAGT TGCAGGGATT AATTCAGGAG 
TCTGAAATGG AGAATATGTT GAAAACTATG CGTGAGCATT TCCCCGTTCG AACAGTGGTG 
ATCGAACAGT CTCTGGATAT GTTTGGTGTC AAACGAAATG AGGACGGGAC GTTACTCTTC 
CCCCGTCACT CCGATAAACG TTTTCCCGTT GCACGTATCC GTAAGCGACT GGCGGCTTAT 
GGCTGGCGAG GAGAACGCCT GAATAAGGAG GTGGCGCGAA TCGTCGCGGG CCCTGATATC 
CTCCCTGAGA GGAGGGACTA CAGCATTATT TTCCCTTACG GATGGGAGAA GAAGCAGCTG 
ACGCGTGAGA TGCGGCGAAT GTTTCTCCGT AAGACGGGCT GA
 
Protein sequence
MSQHNAALWL VRQLQGLIQE SEMENMLKTM REHFPVRTVV IEQSLDMFGV KRNEDGTLLF 
PRHSDKRFPV ARIRKRLAAY GWRGERLNKE VARIVAGPDI LPERRDYSII FPYGWEKKQL 
TREMRRMFLR KTG