Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4906 |
Symbol | |
ID | 6792602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4780263 |
End bp | 4782200 |
Gene Length | 1938 bp |
Protein Length | 645 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642778967 |
Product | lytic murein transglycosylase |
Protein accession | YP_002149525 |
Protein GI | 197250632 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGATAGAG CCAAACCATT TGTCTGGCGT CTCGTCGCCG CCAGCGTATG CCTGCTGACC TTTTGTCACC TCGCGCGGGC CGACTCACTG GAAGAGCAGC GTAACCGCTA TGCGCAGATT AAGCAGGCCT GGGACAACCG CCAGATGGAT GTGGTAGAGC AGATGATGCC GGGTCTGAAA GATTATCCGC TCTACCCGTA TCTGGAATAC CGTAAGATCA CCGACGATTT GATGAACCAA CCGGCGATTG CTGTCACGCA GTTTGTGCGC GCCAATCCTA CGCTTCCGCC TGCGCGTACG CTGCAATCAC GCTTCGTCAA TGAGCTGGCG CGTCGTGAAG ACTGGCGCGG CTTGCTGGCG TTTAGCCCGG AGAAACCCGG CACCACGGAA GCGCAATGTA ACTATTACTA CGCGAAATGG AGTACCGGGC AAACGGAAGC GGCCTGGCAG GGCGCGAAAG ACCTTTGGCT GACCGGCAAA AGTCAGCCGA ATGCCTGCGA TAAACTTTTC AGCGTTTGGC GGGCCTCCGG CAAGCAAGAC CCGCTGGCGT ATCTGGAACG TATTCGGCTG GCGATGAAAG CCGGGAATAC GGGGTTGGTT ACGGTGCTGG CCGGACAGAT GCCGGCGGAA TATCAAACGA TCGCCTCAGC GATCATTACC CTGGCTAATG ACCCTAATAA CGTGTTGACC TTCGCACGCA CCACCGGCGC CACCGATTTT ACCCGCCAGA TGGCGGAAGT CGCGTTTGCC AGCGTCGCCC GCCAGGACGC GGAAAATGCG CGTCTGATGA TCCCCTCGCT GGTACAGGCG CAGAAACTTA ATGAGGAACA AACGCAGGCG CTGCGCGATA TCGTTGCCTG GCGACTGATG GGCAACGATG TGACCGATGC GCAAGCGAAA TGGCGCGATG ACGCGATTAT GCGCTCGCAA TCGACGTCGC TTATCGAACG GCGCGTGCGT ATGGCGCTGG GGATGGGCGA TCGTCGCGGT CTCAATACCT GGCTTGCCCG CCTGCCAATG GAGGCGAAAG AGAAAGACGA GTGGCGTTAC TGGCAGGCGG ATTTATTGCT GGAGCGCGGT CGTGACGCCG AAGCGAAAGA GATCCTTCAT GCTTTAATGC AGAAGCGCGG TTTTTATCCG ATGGTCGCGG CGCAGCGTTT AGGCGAAGAG TACACGCTTA AAATCGATAA AGCGCCCGCC AACGTAAACA GCGCGTTGAC GCAGGGGCCT GAGATGGCGC GTGTACGGGA GCTGATGTAC TGGAACCTGG ATAACACGGC GCGCAGCGAA TGGGCGAATC TGGTAAAAAG CCGTAGTAAA TCTGAACAGG CGCAGCTGGC GCGCTATGCG TTTAACCAGC ACTGGTGGGA TCTGAGCGTA CAGGCGACGA TCGCCGGAAA ACTGTGGGAT CATCTGGAGG AGCGTTTCCC GCTGGCGTAT AACGATCTTT TTACCCGCTA TACCCGCGGA AAAGATATCT CACAAAGCTA TGCCATGGCG ATTGCCCGCC AGGAGAGCGC CTGGAACCCG AAAGTAAAAT CGCCGGTAGG GGCCAGCGGC TTAATGCAGA TTATGCCGGG AACGGCCACC CATACGGTGA AAATGTTTTC GATTCCGGAC TACCGCGGCC CCGGCCAACT GCTGGAGCCG GAGACCAACA TCAACATTGG CACCAGCTAT TTGCAGTATG TCTATCAGCA GTTTGGCAAT AACCGTATTT TCGCCTCGGC GGCGTATAAC GCCGGGCCGG GGCGCGTGCG CACCTGGCTT GGCAATAGCG CCGGGCGTAT CGATGCCGTA GCGTTTGTCG AAAGCATTCC CTTTTCGGAA ACGCGCGGCT ACGTGAAAAA CGTTCTGGCC TATGACGTTT ACTATCGCCA CTTTATGGGG CAGAAAGAGG CCTTAATGAG CGACTCTGAG TGGCAGCGAC GGTATTAA
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Protein sequence | MDRAKPFVWR LVAASVCLLT FCHLARADSL EEQRNRYAQI KQAWDNRQMD VVEQMMPGLK DYPLYPYLEY RKITDDLMNQ PAIAVTQFVR ANPTLPPART LQSRFVNELA RREDWRGLLA FSPEKPGTTE AQCNYYYAKW STGQTEAAWQ GAKDLWLTGK SQPNACDKLF SVWRASGKQD PLAYLERIRL AMKAGNTGLV TVLAGQMPAE YQTIASAIIT LANDPNNVLT FARTTGATDF TRQMAEVAFA SVARQDAENA RLMIPSLVQA QKLNEEQTQA LRDIVAWRLM GNDVTDAQAK WRDDAIMRSQ STSLIERRVR MALGMGDRRG LNTWLARLPM EAKEKDEWRY WQADLLLERG RDAEAKEILH ALMQKRGFYP MVAAQRLGEE YTLKIDKAPA NVNSALTQGP EMARVRELMY WNLDNTARSE WANLVKSRSK SEQAQLARYA FNQHWWDLSV QATIAGKLWD HLEERFPLAY NDLFTRYTRG KDISQSYAMA IARQESAWNP KVKSPVGASG LMQIMPGTAT HTVKMFSIPD YRGPGQLLEP ETNINIGTSY LQYVYQQFGN NRIFASAAYN AGPGRVRTWL GNSAGRIDAV AFVESIPFSE TRGYVKNVLA YDVYYRHFMG QKEALMSDSE WQRRY
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