Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4889 |
Symbol | deoC |
ID | 6796436 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4762625 |
End bp | 4763440 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642778951 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_002149509 |
Protein GI | 197247586 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00126939 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATTTT ATACGGCAAT GCCGTTGGAG AATGTCATGA CTGATTTAAA AGCAAGCAGC CTGCGTGCGC TCAAACTGAT GGATCTGACC ACTCTGAACG ATGACGACAC CAATGAAAAA GTGATCGCGT TGTGTCATCA GGCAAAAACC CCGGTCGGGA ATACGGCGGC GATTTGTATT TACCCGCGTT TTATCCCGAT TGCGCGTAAA ACTCTGAAAG AACAAGGTAC GCCGGACATC CGCATTGCAA CGGTGACTAA CTTCCCGCAT GGCAATGATG ACATCGATAT TGCGCTGGCG GAAACCCGTG CGGCGATCGC CTACGGCGCT GACGAAGTGG ACGTGGTATT CCCGTACCGC GCGTTGATCG CCGGTAACGA GCAGGTGGGT TTTGACCTGG TAAAAGCCTG TAAAGACGCT TGTGCTGCAG CGAACGTATT GCTGAAAGTG ATCATCGAAA CCGGCGAGCT GAAAGAAGAG GCGCTGATTC GTAAAGCCTC TGAAATCTCC ATCAAAGCCG GTGCGGATTT CATCAAAACC TCTACCGGTA AAGTGCCGGT AAACGCTACG CCGGAAAGCG CGCGCATCAT GATGGAAGTG ATCCGCGACA TGGGCGTTTC CAAAACCGTT GGCTTCAAAC CGGCGGGCGG CGTACGTACG GCGGAAGACG CGCAGAAATT CCTCGCGATT GCAGACGAAC TGTTTGGCGC TGACTGGGCA GATTCTCGTC ACTACCGCTT TGGCGCATCC AGCCTGCTGG CAAGCCTGCT GAAAGCGCTG GGTCACGGCG ACGGTAAGAG CGCCAGCAGC TACTAA
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Protein sequence | MKFYTAMPLE NVMTDLKASS LRALKLMDLT TLNDDDTNEK VIALCHQAKT PVGNTAAICI YPRFIPIARK TLKEQGTPDI RIATVTNFPH GNDDIDIALA ETRAAIAYGA DEVDVVFPYR ALIAGNEQVG FDLVKACKDA CAAANVLLKV IIETGELKEE ALIRKASEIS IKAGADFIKT STGKVPVNAT PESARIMMEV IRDMGVSKTV GFKPAGGVRT AEDAQKFLAI ADELFGADWA DSRHYRFGAS SLLASLLKAL GHGDGKSASS Y
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