Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4881 |
Symbol | prfC |
ID | 6794214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4755118 |
End bp | 4756707 |
Gene Length | 1590 bp |
Protein Length | 529 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642778943 |
Product | peptide chain release factor 3 |
Protein accession | YP_002149501 |
Protein GI | 197248593 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG4108] Peptide chain release factor RF-3 |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.180345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTGT CTCCTTATTT GCAAGAGGTG GCCAAACGCC GCACTTTTGC CATTATTTCT CACCCGGACG CCGGTAAAAC CACCATTACC GAAAAAGTGT TGCTGTTCGG ACAGGCGATT CAGACCGCCG GTACGGTAAA AGGCCGTGGC TCCAGCCAAC ATGCAAAATC TGACTGGATG GAGATGGAAA AACAGCGTGG TATCTCTATC ACCACCTCGG TGATGCAGTT CCCGTATCAC GACTGTCTGG TGAACCTGCT GGATACCCCG GGGCACGAAG ACTTCTCCGA AGATACCTAC CGTACTCTGA CGGCGGTGGA CTGTTGTCTG ATGGTGATCG ACGCCGCGAA AGGCGTTGAG GACAGGACCC GTAAGCTGAT GGAAGTTACC CGTCTGCGCG ATACGCCGAT CCTGACCTTT ATGAACAAAC TCGACCGTGA CATCCGCGAC CCGATGGAGC TGCTGGATGA AGTCGAGAAC GAGCTGAAAA TCGGCTGCGC GCCGATCACC TGGCCGATTG GCTGCGGCAA GCTGTTTAAG GGCGTTTATC ACCTTTATAA AGATGAAACT TATCTGTATC AGACCGGTAA GGGCCACACC ATTCAGGAAG TGCGCATCGT TAAAGGGCTG AATAACCCGG ATCTGGACGC CGCCGTCGGT GAAGACCTGG CGCAACAGCT GCGCGACGAG CTGGAACTGG TGCAGGGCGC GTCTAACGAG TTTGATGAAG AGCTGTTCCT GGCAGGGGAA ATTACCCCGG TATTTTTCGG TACCGCGCTG GGTAACTTTG GCGTTGACCA TATGCTGGAT GGTTTAGTGG CGTGGGCGCC CGCGCCGATG CCGCGTCAAA CCGATACCCG CACAGTGGAA GCCTCAGAAG AGAAGTTCAC CGGTTTTGTC TTTAAAATTC AGGCCAATAT GGACCCGAAA CACCGCGACC GCGTGGCGTT TATGCGCGTG GTTTCCGGTA AGTATGAGAA GGGCATGAAG CTACGCCAGG TCCGTACCGG CAAAGATGTG GTGATTTCCG ACGCGTTAAC TTTTATGGCG GGCGACCGTT CGCACGTTGA AGAAGCGTAC CCGGGCGATA TTTTGGGTCT GCATAACCAC GGCACCATTC AGATCGGCGA TACCTTCACC CAGGGCGAGA TGATGAAGTT TACCGGTATC CCGAACTTTG CGCCGGAACT GTTCCGTCGT ATTCGCCTGA AAGATCCGCT CAAGCAGAAG CAGCTACTGA AAGGGCTGGT GCAGCTTTCT GAAGAGGGGG CGGTTCAGGT ATTCCGTCCC ATCTCCAACA ACGATCTGAT TGTCGGCGCC GTGGGCGTTT TGCAGTTTGA CGTTGTTGTC GCGCGCCTGA AAAGCGAATA CAACGTTGAG GCGATTTATG AATCCGTCAA CGTGGCGACG GCGCGCTGGG TGGAAAGCGC CGATGCGAAG AAATTCGAAG AGTTTAAGCG TAAGAATGAA ACGCAGCTGG CGCTGGATGG CGGCGACAAC CTTACCTATA TCGCCCCCAC GATGGTTAAC CTGAACCTGA CCCAGGAACG TTACCCTGAC GTTCAGTTCC GTAAAACGCG CGAACACTGA
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Protein sequence | MTLSPYLQEV AKRRTFAIIS HPDAGKTTIT EKVLLFGQAI QTAGTVKGRG SSQHAKSDWM EMEKQRGISI TTSVMQFPYH DCLVNLLDTP GHEDFSEDTY RTLTAVDCCL MVIDAAKGVE DRTRKLMEVT RLRDTPILTF MNKLDRDIRD PMELLDEVEN ELKIGCAPIT WPIGCGKLFK GVYHLYKDET YLYQTGKGHT IQEVRIVKGL NNPDLDAAVG EDLAQQLRDE LELVQGASNE FDEELFLAGE ITPVFFGTAL GNFGVDHMLD GLVAWAPAPM PRQTDTRTVE ASEEKFTGFV FKIQANMDPK HRDRVAFMRV VSGKYEKGMK LRQVRTGKDV VISDALTFMA GDRSHVEEAY PGDILGLHNH GTIQIGDTFT QGEMMKFTGI PNFAPELFRR IRLKDPLKQK QLLKGLVQLS EEGAVQVFRP ISNNDLIVGA VGVLQFDVVV ARLKSEYNVE AIYESVNVAT ARWVESADAK KFEEFKRKNE TQLALDGGDN LTYIAPTMVN LNLTQERYPD VQFRKTREH
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