Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4872 |
Symbol | |
ID | 6794864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 4750276 |
End bp | 4751202 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642778934 |
Product | diguanylate cyclase |
Protein accession | YP_002149495 |
Protein GI | 197249334 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000065621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGGA TAGTGGTCCT GAGCGTATTA CTGTTGATAT GGCATGGGAA ATATGGGCAA AAAAGAATTA ATCTCCCCTT TATCTCCCTA CTCTTTGGGG GAATATGGGC GGCGCATATT GCGCTAAAGT ATCCGGCGTT AGGCCATTAT GATTTCTCTT TTTTACTGAT CTCCCTGCTT AGCGTTCTGT TTATCGGCTC GATAGCCTTT GCCGCGAATA TCGTCGCGTT TACGCTCTAT TCGCTACCGC CAGTCGCGGT CTGCCTGTGG CTGAACGGTA ATGAACAAGG TTTGCGAATT CTCTATTTGC TGGCCCTGCC AATGGTGGGA ATCGCTATTC AACATGTTAT CCAGAAACGC TACGATAATT TTGCCCAACA GCTCATGTTT AAGCTGCTGG CCGAGCGGGA AACTCTCAAT GGCCTGAGTA TGCTTGATCC ATTAACCGGC TTATATAACC GCCGTGGCCT GCAAAATCGG CTGGATACGT TACAGGCGCC GGGCAGCCAT GAACACTACG TCCTGCTATT GGATATCGAT CATTTCAAAG CGTACAACGA TCACTACGGT CATATGATGG GCGATCAGGC GTTAATCCGC GTCTCAGCGG CAATTCGGGA CGCCGTGCGA TCGCGCGATG TCGTCTGCCG TTTTGGCGGG GAAGAATTTC TGGTGTTGCT GACCACCGCC GAACCACAGC AAGCCCGCGC TACCGCAGAA CGTATCCGAC AGGAAGTATA CGATCTTAAA ATCCCGCATA TGTTTAACGA AAGCGTCGCC ACCAATGTCA CTGTCAGTAT CGGCATTGCG CCCCTGACGG ATCGCAATAT CGGAGACGCT ATCGAAAAAG CGGATAAAGC ACTCTACGAA GCCAAGCATC TTGGACGTAA CCACATTCTG GTCAGCGACG ACATGCGCGC CCTATGA
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Protein sequence | MIGIVVLSVL LLIWHGKYGQ KRINLPFISL LFGGIWAAHI ALKYPALGHY DFSFLLISLL SVLFIGSIAF AANIVAFTLY SLPPVAVCLW LNGNEQGLRI LYLLALPMVG IAIQHVIQKR YDNFAQQLMF KLLAERETLN GLSMLDPLTG LYNRRGLQNR LDTLQAPGSH EHYVLLLDID HFKAYNDHYG HMMGDQALIR VSAAIRDAVR SRDVVCRFGG EEFLVLLTTA EPQQARATAE RIRQEVYDLK IPHMFNESVA TNVTVSIGIA PLTDRNIGDA IEKADKALYE AKHLGRNHIL VSDDMRAL
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