Gene SeAg_B4566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B4566 
Symbol 
ID6794558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp4471290 
End bp4472009 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID642778652 
ProductDNA-binding transcriptional activator DcuR 
Protein accessionYP_002149218 
Protein GI197247708 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4565] Response regulator of citrate/malate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAATG TATTAATTGT CGATGACGAT GCGATGGTCG CGGAGTTAAA TCGCCGCTAT 
GTCGCGCAAA TCTCCGGTTT TCATTGTTGT GGAACCGCTT CGACGCTGGA AAAAGCGAAA
GAGTTTATCT TCAACAGTGA AAATCACATT GACCTAATCC TGCTGGATAT CTACATGCAG
CAGGAAAACG GATTGGATCT GCTGCCTGTC CTGCACAGCG CAGGCTGCAA AAGTGACGTT
ATTGTCATTT CTTCTGCCGC TGACGCCGCC ACCATTAAAG ATTCGCTTCA CTACGGCGTG
GTGGATTATC TGATCAAGCC TTTTCAGGCC ACGCGCTTTG AAGAAGCGCT GACCGGCTGG
CTACGTAAGA AAACGGCGAT GGAAAAACGC CAGTATTACG AACAGTCTGA GCTTGACCTG
CTCATTCACG GTAATTCATC CAGCGAGCAG GAGCCTCGCC GGCTGCCAAA AGGGCTGACG
CAGCAAACGC TACGCACCTT ATGTCAGTGG ATTGATGCGC ATCAGGAGCA GGAATTTTCT
ACCGACGAGT TGGCCAACGA AGTGAATATC TCGCGCGTCT CCTGCCGTAA ATATCTCATC
TGGCTGGTGA ATTGCCATAT CTTGTTTACC AGTATTCATT ACGGCGTGAC CGGCAGGCCG
GTTTACCGCT ACCGCGTTCA GCCGGAACAT TACTCTTTAC TGAAACAATA TTGTCAGTAA
 
Protein sequence
MINVLIVDDD AMVAELNRRY VAQISGFHCC GTASTLEKAK EFIFNSENHI DLILLDIYMQ 
QENGLDLLPV LHSAGCKSDV IVISSAADAA TIKDSLHYGV VDYLIKPFQA TRFEEALTGW
LRKKTAMEKR QYYEQSELDL LIHGNSSSEQ EPRRLPKGLT QQTLRTLCQW IDAHQEQEFS
TDELANEVNI SRVSCRKYLI WLVNCHILFT SIHYGVTGRP VYRYRVQPEH YSLLKQYCQ