Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4565 |
Symbol | dcuB |
ID | 6793361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | - |
Start bp | 4469220 |
End bp | 4470560 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642778651 |
Product | anaerobic C4-dicarboxylate transporter |
Protein accession | YP_002149217 |
Protein GI | 197248488 |
COG category | [R] General function prediction only |
COG ID | [COG2704] Anaerobic C4-dicarboxylate transporter |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases [TIGR00770] anaerobic c4-dicarboxylate membrane transporter family protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATTTA GTATACAGCT TCTCATAATA TTAATATGTC TGTTTTATGG CGCCCGAAAG GGCGGCATCG CGCTCGGGTT GTTGGGCGGT ATCGGTTTGG TCATTCTGGT GTTTGTTTTC CATCTCCAGC CAGGTAAACC GCCCGTTGAC GTAATGCTGG TCATTATCGC GGTAGTCGCC GCGTCGGCGA CGTTGCAGGC ATCAGGCGGG CTGGATGTGA TGCTGCAGAT TGCCGAAAAG CTGCTGCGTC GCAACCCCAA ATACGTCTCT ATTGTGGCGC CGTTCGTCAC CTGTACCCTG ACGATTCTGT GTGGGACAGG CCACGTGGTC TACACCATTT TGCCGATTAT CTATGACGTG GCGATCAAGA ATAATATCCG TCCGGAACGT CCAATGGCGG CCAGTTCTAT CGGCGCGCAA ATGGGTATCA TCGCCAGTCC GGTTTCCGTC GCCGTTGTTT CTCTGGTAGC GATGCTGGGC AACGTGACAT TTGACGGAAA ACATCTGGAG TTCCTCGATC TGCTGTCGAT CACCATCCCG TCTACCCTGC TCGGTATCCT GGCAATCGGT ATTTTTAGTT GGTTCCGCGG TAAAGATCTG GATAAAGACG AAGCGTTTCA GAAATTTATT TCCGTACCGG AAAACCGTCA GTACGTGTAC GGCGATACCG CGACGCTGCT GGATAAAAAA CTGCCGAAAA GCAACTGGCT GGCGATGTGG ATCTTCCTGG CGGCGATTGC CGTGGTCGCT CTCCTGGGCG CGGACTCCGA CTTACGTCCA ACCTTCGGCG GCAAACCGTT GTCGATGGTG CTGGTCATTC AGATGTTTAT GCTGCTGACC GGGGCGCTCA TTATCATCCT GACCAAAACC AATCCTGCGT CTATCTCAAA AAACGAAGTT TTTCGTTCCG GTATGATTGC GATTGTCGCG GTATACGGGA TCGCCTGGAT GGCGGAAACC ATGTTCGGCG CGCATATGTC GGAAATTCAG GGCGTGCTGG GCGAAATGGT CAAAGAGTAT CCGTGGGCCT ATGCCATCGT TCTGCTTCTG GTCTCCAAGT TTGTTAACTC CCAGGCAGCG GCGCTGGCGG CGATTGTTCC CGTCGCGCTG GCTATCGGTG TCGATCCGGC GTATATCGTG GCCTCTGCGC CGGCATGTTA TGGCTACTAT ATCTTGCCGA CCTACCCAAG CGATCTGGCG GCGATTCAGT TTGACCGTTC CGGCACAACC CGTATTGGCC GCTTCGTCAT TAACCACAGC TTCATTCTGC CGGGTTTGAT TGGCGTGAGC GTCTCCTGCG TCTTTGGCTG GATCTTTGCC GCAATGTACG GATTCCTGTA A
|
Protein sequence | MLFSIQLLII LICLFYGARK GGIALGLLGG IGLVILVFVF HLQPGKPPVD VMLVIIAVVA ASATLQASGG LDVMLQIAEK LLRRNPKYVS IVAPFVTCTL TILCGTGHVV YTILPIIYDV AIKNNIRPER PMAASSIGAQ MGIIASPVSV AVVSLVAMLG NVTFDGKHLE FLDLLSITIP STLLGILAIG IFSWFRGKDL DKDEAFQKFI SVPENRQYVY GDTATLLDKK LPKSNWLAMW IFLAAIAVVA LLGADSDLRP TFGGKPLSMV LVIQMFMLLT GALIIILTKT NPASISKNEV FRSGMIAIVA VYGIAWMAET MFGAHMSEIQ GVLGEMVKEY PWAYAIVLLL VSKFVNSQAA ALAAIVPVAL AIGVDPAYIV ASAPACYGYY ILPTYPSDLA AIQFDRSGTT RIGRFVINHS FILPGLIGVS VSCVFGWIFA AMYGFL
|
| |