| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4539 |
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| Symbol | nrfD |
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| ID | 6793419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 4438447 |
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| End bp | 4439403 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642778628 |
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| Product | cytochrome c nitrite reductase, NrfD subunit |
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| Protein accession | YP_002149194 |
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| Protein GI | 197250898 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | [TIGR03148] cytochrome c nitrite reductase, NrfD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATCCG CTTCTCCATT TCATTTTGCA TCACTGGTGT GGGACTGGCC CATCGCCATC
TATCTGTTTC TGATTGGCAT CTCCGCCGGA CTGGTTACGT TGGCGATTCT GCTGCGTCGC
TTCCATCCGG AGGCGGGCGG TTCGGACAGC ACGCTGCTGC GCACTACGCT GGTGTTAGGG
CCGGGGGCGA TTATCTTCGG TCTGCTGATT CTGGTCTTCC ACCTGACGCG CCCGTGGACC
TTCTGGAAGC TGATGTTCCA CTACAGCTTT ACCTCGGTGA TGTCGATGGG GGTGATGCTG
TTCCAGTTGT ACATGGTAGT GCTGGTGCTG TGGCTGGCGA AAATCTTTGA AAAAGAGGTG
ATTGCCCTGC AACAGCGTTG GCTGCCGCGG TTAGGGATCG TGCAAAAAGT GTTGGCGCTA
ATAACGCCGT TTCATCGCGC GCTGGAGACG TTAATGCTGG TACTGGCGGT TCTGCTCGGA
GCGTACACCG GCTTTCTGCT GTCGGCGCTG AAATCCTATC CGTTCCTGAA TAACCCGATC
CTGCCGGCGC TGTTTCTGTT CTCCGGGATT TCCTCCGGCG CGGCGGTGGC GCTGATCGCC
ATGGCGTTAC GCCATCGTAG CAACCCGCAC AGCACTGAAG CGCGCTTTGT GCATCGCATG
GAGGTTCCGG TGGTATGGCT GGAAATTTTC CTGCTGGCGG CGTTCTTCGT CGGTCTGGCG
CTGGGCGATG ACGGCAAAAT GCGCGCGCTG GCGGCGGCGC TGGGCGGCGG ATTCTGGAGC
TGGTGGTTCT GGCTTGGCGT CGTAGGGCTG GGATTGATTA TCCCGATGCT GCTGAAACCC
TGGGCAAACC GTAGCGTCAC GTTTCACGGC GTGCTGGCCG TTTGCGGCGC CAGTTTGACC
GGCGTGCTGC TGCTGCGCTT TTTCATTCTT TATGCGGGAC AGCTAACGGT TGCATAA
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| Protein sequence | MTSASPFHFA SLVWDWPIAI YLFLIGISAG LVTLAILLRR FHPEAGGSDS TLLRTTLVLG
PGAIIFGLLI LVFHLTRPWT FWKLMFHYSF TSVMSMGVML FQLYMVVLVL WLAKIFEKEV
IALQQRWLPR LGIVQKVLAL ITPFHRALET LMLVLAVLLG AYTGFLLSAL KSYPFLNNPI
LPALFLFSGI SSGAAVALIA MALRHRSNPH STEARFVHRM EVPVVWLEIF LLAAFFVGLA
LGDDGKMRAL AAALGGGFWS WWFWLGVVGL GLIIPMLLKP WANRSVTFHG VLAVCGASLT
GVLLLRFFIL YAGQLTVA
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