| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4488 |
|---|
| Symbol | lamB |
|---|
| ID | 6794042 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4371710 |
|---|
| End bp | 4373068 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642778579 |
|---|
| Product | maltoporin |
|---|
| Protein accession | YP_002149145 |
|---|
| Protein GI | 197250174 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4580] Maltoporin (phage lambda and maltose receptor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGATTA CTCTGCGCAA ACTCCCACTG GCGGTTGCTG TCGCAGCGGG CGTAATGTCC
GCTCAGGCAA TGGCTGTCGA TTTCCACGGT TACGCCCGTT CCGGTATTGG CTGGACGGGA
AGCGGCGGCG AACAACAGTG TTTCCAGGCA ACAGGTGCCC AAAGTAAATA CCGTCTCGGT
AACGAATGTG AAACCTATGC GGAACTGAAA CTGGGCCAGG AAGTGTGGAA AGAGGGCGAT
AAGAGCTTCT ATTTCGACAC CAACGTCGCC TATTCGGTTA ACCAGCAGAA CGACTGGGAA
TCGACCGATC CCGCCTTCCG CGAAGCGAAC GTGCAGGGTA AAAACCTGAT TGAATGGCTG
CCGGGCTCTA CCATCTGGGC CGGTAAGCGC TTCTATCAGC GTCATGACGT ACACATGATC
GACTTCTACT ACTGGGATAT TTCAGGTCCT GGCGCGGGTA TCGAAAATAT CGATCTGGGC
TTCGGTAAGC TTTCGCTGGC GGCGACCCGG TCTACTGAAG CGGGCGGCTC TTACACCTTC
AGCAGCCAGA ATATTTATGA TGAAGTAAAA GATACCGCTA ACGACGTCTT TGACGTACGT
CTGGCTGGTC TGCAAACGAA CCCGGACGGC GTACTGGAGC TGGGCGTTGA TTACGGCCGC
GCCAATACGA CCGATGGTTA TAAGCTGGCT GATGGGGCAT CGAAAGACGG CTGGATGTTC
ACCGCCGAAC ACACGCAAAG CATGTTGAAA GGCTATAACA AGTTTGTCGT GCAATATGCC
ACCGATGCCA TGACCACGCA GGGTAAAGGC CAGGCGCGCG GTTCCGACGG TTCTTCATCT
TTCACTGAAG AATTGCCTGA TGGAACCAAA ATTAATTATG CCAATAAGGT CATCAATAAT
AATGGCAATA TGTGGCGTAT TTTGGATCAT GGCGCCATCT CGCTTGGTGA TAAATGGGAT
TTGATGTACG TCGGTATGTA CCAGAATATC GATTGGGATA ATAACCTGGG TACTGAGTGG
TGGACCGTGG GCGTACGTCC AATGTACAAG TGGACGCCAA TCATGAGCAC CCTGCTGGAA
GTCGGCTACG ACAACGTGAA ATCTCAGCAG ACCGGCGATC GTAACAATCA ATATAAAATC
ACCCTGGCGC AACAGTGGCA GGCGGGCGAC AGCATCTGGT CGCGTCCGGC TATCCGTATT
TTCGCCACCT ACGCGAAATG GGATGAGAAA TGGGGCTATA TCAAAGACGG CGATAACATT
TCCCGTTATG CCGCAGCGAC TAACTCCGGC ATTTCCACCA ACAGCCGTGG CGATAGCGAT
GAGTGGACCT TCGGCGCCCA GATGGAAATC TGGTGGTAA
|
|---|
| Protein sequence | MMITLRKLPL AVAVAAGVMS AQAMAVDFHG YARSGIGWTG SGGEQQCFQA TGAQSKYRLG
NECETYAELK LGQEVWKEGD KSFYFDTNVA YSVNQQNDWE STDPAFREAN VQGKNLIEWL
PGSTIWAGKR FYQRHDVHMI DFYYWDISGP GAGIENIDLG FGKLSLAATR STEAGGSYTF
SSQNIYDEVK DTANDVFDVR LAGLQTNPDG VLELGVDYGR ANTTDGYKLA DGASKDGWMF
TAEHTQSMLK GYNKFVVQYA TDAMTTQGKG QARGSDGSSS FTEELPDGTK INYANKVINN
NGNMWRILDH GAISLGDKWD LMYVGMYQNI DWDNNLGTEW WTVGVRPMYK WTPIMSTLLE
VGYDNVKSQQ TGDRNNQYKI TLAQQWQAGD SIWSRPAIRI FATYAKWDEK WGYIKDGDNI
SRYAAATNSG ISTNSRGDSD EWTFGAQMEI WW
|
|---|
| |