| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4444 |
|---|
| Symbol | |
|---|
| ID | 6795798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4335108 |
|---|
| End bp | 4335977 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642778535 |
|---|
| Product | 23S rRNA pseudouridine synthase F |
|---|
| Protein accession | YP_002149101 |
|---|
| Protein GI | 197247683 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACCG ACACATCTAC CCGGCTTAAT AAATATATCA GTGAAAGCGG CATCTGTTCG
CGTCGCGAGG CGGACCGTTT TATCGAACAG GGCAATGTCT TTATCAACGG CAAACGCGCC
GCCATTGGCG ATCAGGTGGT CGCCGGGGAT GTTGTTAAAG TAAATGGTCG GTTGATTGAG
CCGCGAGAAG CGGATGATTT AGTGCTGATT GCGCTGAATA AACCGGTTGG CATTGTCAGT
ACCACTGAAG ACGGCGAACG AGACAATATT GTCGATTTTG TGAACCACAG CAAACGTATC
TTCCCGATTG GTCGTCTGGA TAAAGACTCG CAGGGACTGA TATTTCTGAC TAACCACGGC
GATCTGGTCA ATAAGATTCT GCGTGCCGGT AACGATCACG AAAAAGAGTA TCTGGTGACG
GTGGATAAAC CGATTACCGA CGAGTTTATT CGCGGTATGG GCGCTGGCGT GCCGATTCTG
GGTACCGTCA CCAAAAAATG TAAGGTGAAA AAAGAGGCGC CGTTTGTCTT TCGCATCACC
CTGGTGCAGG GATTAAACCG TCAGATCCGT CGTATGTGTG AATACTTTGG TTATGAAGTG
ACGAAACTGG AGCGTACGCG CATTATGAAC GTCAGCCTGA GCGGGATTCC TTTGGGCGAG
TGGCGCGATC TGACGGACGA TGAGCTGATC GATCTGTTTA AGTTGATTGA GCATTCCTCT
TCCGAAGCCA AACCAAAGGC CAAAGCGAAG CCGAAGACCA CGGGTATTAA GCGACCGGTC
GTTGCGATCG AAAAAAGCAA TGAGAAAGCG CGCCCGGCAT CAAGCGGTAA GCGCTTTACC
TCGCCGGGAC GAAAGAAGAA AGGACGTTAA
|
|---|
| Protein sequence | MLTDTSTRLN KYISESGICS RREADRFIEQ GNVFINGKRA AIGDQVVAGD VVKVNGRLIE
PREADDLVLI ALNKPVGIVS TTEDGERDNI VDFVNHSKRI FPIGRLDKDS QGLIFLTNHG
DLVNKILRAG NDHEKEYLVT VDKPITDEFI RGMGAGVPIL GTVTKKCKVK KEAPFVFRIT
LVQGLNRQIR RMCEYFGYEV TKLERTRIMN VSLSGIPLGE WRDLTDDELI DLFKLIEHSS
SEAKPKAKAK PKTTGIKRPV VAIEKSNEKA RPASSGKRFT SPGRKKKGR
|
|---|
| |