| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4417 |
|---|
| Symbol | |
|---|
| ID | 6795155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4306625 |
|---|
| End bp | 4308022 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642778511 |
|---|
| Product | sensor protein ZraS |
|---|
| Protein accession | YP_002149081 |
|---|
| Protein GI | 197249706 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00746463 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTTTA TACGATTACA TAAAGATGCC GCTGCAACGT GGTTGAGTCG ACTGTTACCT
GTGGCGATCT TCATTTTGGT GGGGCTATTT TCCATTATGG TCATTCGCGA CTATGGCCGT
GAGAGCGCTG CCGCCAGGCA GACGCTGCTG GAAAAGGGAA ATGTACTCAT TCGCGCTCTG
GAGTCCGGCA CGCGAGTAGG TATGGGAATG CGGATGCATC ACGCGCAGCA GCAGACATTG
CTGGAAGAGA TGGCGGGTCA GCCAGGCGTG TTGTGGTTCG CCGTAACGGA TGCGCAGGGG
GTAATCATTA CTCATAGCAA CCCTGGCATG GTGGGCAAAT CGCTCTATTC CGCATCTGAA
ATGCATCAAC TAAACCCCGG GCCGCAGGAG CGTTGGCGGC GTGTCGACGT TGCTGCTAAC
GGCGAGACGG TGCCTGCGCT GGAAATTTAC CGTCAGTTCC AGCCGCTTTT CGGTATGAGA
GGTCACGGTA TGAGGGGGCA CGGCATAGCG CGTAGCGCCA ATGACGACGA ACCAGCGAAA
CAAACTATTT TTATTGCCTT TGACGCCAGC GAGCTGGCCG CGACACAGGC AAGGGAGTGG
CGTAATACGC TGATTGTTTT GTCTGCGTTA GCGGCGGTGC TGTTGGCAAC GTTACTGGCG
TTTTTTTGGC ATCAGCGTTA TCAGCGCTCA CACAGAGAAC TGCTTGATGC AATGAAGCGT
AAAGAAAAGC TGGTGGCGAT GGGGCATCTG GCGGCGGGCG TCGCGCACGA AATTCGTAAC
CCGCTCTCGT CCATCAAAGG GCTGGCGAAA TACTTTGCCG AGCGCACGCC AGCCGGTGGC
GAGTCGCATG AACTGGCGCA GGTGATGGCC AAAGAGGCCG ACCGTTTGAA CCGGGTGGTA
AGCGAATTGC TCGAACTGGT AAAGCCCGCG CATCTGACGC TCCAGACGGT TAACCTCAAT
GATATTATTA CTCACTCCCT GAATCTGGTC AGTCAGGATG CCCAAAGCAG AGAGATTCAG
TTGAGGTTCA CGGCGAATGA GACGCTTAAG CGTATTCAGG CTGACCCGGA CAGGCTGACT
CAGGTGCTGT TGAATTTGTA CCTGAACGCT ATTCATGCGA TTGGCCGCCA GGGAACGATT
AGCGTAGAGG CAAAAGAAAG TGGGACCGAC CGCGTTATCA TCACTGTTAC CGATAGCGGG
AAAGGGATCG CCCCGGATCA GTTGGAGGCG ATTTTTACGC CTTATTTTAC GACCAAAGCT
GACGGGACAG GTCTGGGGCT GGCGGTGGTG CAAAATATCA TCGAACAGCA TGGCGGCGCG
ATTAAGGTGA AAAGTATTGA GGGTAAAGGC GCGGTCTTTA CTATCTGGTT GCCAGTGATA
GCGAGACAAC AGGATTAA
|
|---|
| Protein sequence | MSFIRLHKDA AATWLSRLLP VAIFILVGLF SIMVIRDYGR ESAAARQTLL EKGNVLIRAL
ESGTRVGMGM RMHHAQQQTL LEEMAGQPGV LWFAVTDAQG VIITHSNPGM VGKSLYSASE
MHQLNPGPQE RWRRVDVAAN GETVPALEIY RQFQPLFGMR GHGMRGHGIA RSANDDEPAK
QTIFIAFDAS ELAATQAREW RNTLIVLSAL AAVLLATLLA FFWHQRYQRS HRELLDAMKR
KEKLVAMGHL AAGVAHEIRN PLSSIKGLAK YFAERTPAGG ESHELAQVMA KEADRLNRVV
SELLELVKPA HLTLQTVNLN DIITHSLNLV SQDAQSREIQ LRFTANETLK RIQADPDRLT
QVLLNLYLNA IHAIGRQGTI SVEAKESGTD RVIITVTDSG KGIAPDQLEA IFTPYFTTKA
DGTGLGLAVV QNIIEQHGGA IKVKSIEGKG AVFTIWLPVI ARQQD
|
|---|
| |