| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4410 |
|---|
| Symbol | nudC |
|---|
| ID | 6794861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4301520 |
|---|
| End bp | 4302293 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642778504 |
|---|
| Product | NADH pyrophosphatase |
|---|
| Protein accession | YP_002149074 |
|---|
| Protein GI | 197249365 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.172037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGTA TAATTGAAAA ATTAGAGAGT GGCTGGTGGA TCGTCAGCCA TGAACAAAAA
TTATGGTTGC CGTATGGGGA ATTACCACAC GGGCTGGCGG CAAATTTCGA TCTTGTGGGG
CAGCGCGCAC TCCGGATAGG TGAATGGCAA GGCGAGCCCG TCTGGCTGGT GTTACAGCAT
CGACGCCATG ATATGGGATC GGTTCGCCAG GTTATCGATC AGGATGCCGG GTTGTTCCAA
CTGGCGGGAC GTGGCGTACA GTTGGCGGAG TTTTACCGAT CGCATAAATT TTGCGGCTAT
TGCGGGCACC CTATGCACCC GAGTAAAACC GAATGGGCGA TGCTGTGCAG CCATTGCCGC
GAACGCTACT ATCCGCAAAT CGCCCCCTGC ATTATTGTTG CCATTCGCCG TGAGGATTCC
ATCCTGCTGG CCCAGCACGT TCGCCACCGC AACGGCGTGC ATACGGTACT GGCCGGGTTT
GTTGAAGTCG GCGAAACCTT AGAACAGGCG GTCGCGCGAG AGGTAATGGA GGAGAGCGGC
ATTAAGGTGA AAAATCTGCG CTACATTACT TCGCAGCCGT GGCCTTTTCC GCAGTCGTTG
ATGACCGCTT TTATGGCGGA GTATGACAGC GGCGAGATTG TCATCGACCC GAAAGAACTG
TTGGAAGCAA ATTGGTACCG TTATGACGAT CTGCCGCTAC TACCGCCGCC GGGCACCGTC
GCGCGCCGTT TGATCGAAGA TACGGTGGCA ATGTGTCGGG CTGAATATGA TTGA
|
|---|
| Protein sequence | MDRIIEKLES GWWIVSHEQK LWLPYGELPH GLAANFDLVG QRALRIGEWQ GEPVWLVLQH
RRHDMGSVRQ VIDQDAGLFQ LAGRGVQLAE FYRSHKFCGY CGHPMHPSKT EWAMLCSHCR
ERYYPQIAPC IIVAIRREDS ILLAQHVRHR NGVHTVLAGF VEVGETLEQA VAREVMEESG
IKVKNLRYIT SQPWPFPQSL MTAFMAEYDS GEIVIDPKEL LEANWYRYDD LPLLPPPGTV
ARRLIEDTVA MCRAEYD
|
|---|
| |