Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4392 |
Symbol | rplA |
ID | 6793949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4282180 |
End bp | 4282884 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642778491 |
Product | 50S ribosomal protein L1 |
Protein accession | YP_002149061 |
Protein GI | 197248028 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0081] Ribosomal protein L1 |
TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000168999 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAAAC TGACCAAGCG TATGCGCGTG ATCCGTGAAA AAGTTGATGC GACCAAACAG TACGACATCA ACGAAGCTAT TGCCCTGCTG AAAGAGCTGG CCACTGCTAA ATTCAACGAA AGCGTTGACG TTGCCGTTAA CCTCGGCATC GACGCTCGTA AATCTGACCA GAACGTTCGT GGCGCGACTG TACTGCCGCA CGGTACTGGC CGTTCTGTTC GCGTTGCCGT ATTTACCCAG GGCCCGAACG CTGAAGCAGC TAAAGCTGCT GGCGCTGAGC TGGTAGGTAT GGAAGATCTG GCTGACCAGA TCAAGAAAGG CGAAATGAAC TTCGACGTTG TTATCGCATC CCCGGATGCA ATGCGCGTTG TTGGCCAGCT GGGCCAGGTT CTGGGTCCGC GCGGCCTGAT GCCAAACCCG AAAGTCGGTA CCGTAACGCC GAACGTTGCT GAAGCGGTTA AGAACGCTAA AGCAGGTCAG GTCCGTTACC GTAACGACAA AAACGGCATC ATCCACACCA CCATCGGTAA AGTGGACTTT GACGCTGACA AACTGAAAGA AAACCTGGAA GCTCTGCTGG TTGCGCTGAA AAAAGCAAAA CCGAGCCAGG CGAAAGGCGT GTACATCAAG AAAGTTAGCA TCTCCACCAC CATGGGTGCT GGCGTTGCCG TTGATCAGGC TGGTCTGAGC GCATCTGCGA ACTAA
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Protein sequence | MAKLTKRMRV IREKVDATKQ YDINEAIALL KELATAKFNE SVDVAVNLGI DARKSDQNVR GATVLPHGTG RSVRVAVFTQ GPNAEAAKAA GAELVGMEDL ADQIKKGEMN FDVVIASPDA MRVVGQLGQV LGPRGLMPNP KVGTVTPNVA EAVKNAKAGQ VRYRNDKNGI IHTTIGKVDF DADKLKENLE ALLVALKKAK PSQAKGVYIK KVSISTTMGA GVAVDQAGLS ASAN
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