Gene SeAg_B4347 details

Gene Information

• Locus tag: SeAg_B4347
• Symbol: metB
• ID: 6795481
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 4236102
• End bp: 4237262
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 642778450
• Product: cystathionine gamma-synthase
• Protein accession: YP_002149029
• Protein GI: 197249724
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases
• TIGRFAM ID: [TIGR02080] O-succinylhomoserine (thiol)-lyase

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGCGTA AACAGGCCAC TATCGCAGTG CGTAGCGGAT TAAACGACGA CGAGCAATAC 
GGCTGCGTTG TGCCGCCAAT CCATCTCTCC AGCACCTATA ACTTTACCGG TTTCAATGAG 
CCGCGCGCGC ATGATTATTC CCGCCGCGGT AATCCCACGC GTGATGTTGT TCAGCGCGCA 
TTAGCGGAAC TGGAAGGCGG CGCGGGCGCG GTATTGACGA ATACCGGCAT GTCGGCGATT 
CATCTGGTCA CCACCGTTTT CCTCAAGCCG GGCGATCTGC TGGTCGCGCC GCATGATTGC 
TATGGCGGCA GTTATCGTCT GTTTGACAGT CTGGCGACAC GCGGCTGTTA TCGTGTGCGG 
TTTGTCGATC AGGGTGATGA ACGCGCCTTA CAGGCGGCGC TGGAAGAAAA ACCGAAGCTG 
GTACTGGTAG AAAGTCCAAG TAATCCATTG TTACGCGTGG TGGATATTGC GAAAATCTGT 
CGGCTGGCGC GCGAGGCGGG CGCAGTGAGC GTCGTTGATA ACACGTTTTT AAGCCCGGCG 
CTGCAAAATC CGCTGGCGTT GGGTGCCGAT CTGGTGTTGC ATTCATGCAC GAAATATCTC 
AATGGTCATT CGGATGTTGT GGCCGGCGTG GTGATTGCTA AAGATCCGGA AATGGTCACT 
GAACTGGCGT GGTGGGCGAA TAATATTGGC GTGACCGGCG GGGCGTTTGA TAGCTATCTG 
CTGCTGCGCG GTTTGCGAAC TCTGGTGCCG CGTATGGAGC TGGCGCAGCG CAACGCGCAG 
GCGATTGTGA AATATCTGCA AACCCAGCCG TTGGTGAAAA AACTGTATCA CCCGTCGCTG 
CCGGAAAATC AGGGGCATGA AATTGCCGCG CGCCAGCAAA AAGGCTTTGG CGCAATGTTG 
AGTTTTGAAC TGGATGGGGA TGAGGAGACG CTGCGTCGTT TTCTGGGCGG GCTGTCGCTG 
TTTACGCTGG CGGAATCTTT AGGGGGAGTG GAAAGTTTGA TCTCTCACGC CGCCACCATG 
ACGCATGCCG GTATGTCGCC GCAGGCGCGT GCCGCCGCCG GGATCTCCGA AACGCTACTG 
CGTATCTCCA CCGGTATTGA AGATGGCGAA GATTTAATTG CCGACCTGGA AAATGGCTTC 
CGGGCTGCAA ACAAGGGGTA A 

 

Protein sequence

MTRKQATIAV RSGLNDDEQY GCVVPPIHLS STYNFTGFNE PRAHDYSRRG NPTRDVVQRA 
LAELEGGAGA VLTNTGMSAI HLVTTVFLKP GDLLVAPHDC YGGSYRLFDS LATRGCYRVR 
FVDQGDERAL QAALEEKPKL VLVESPSNPL LRVVDIAKIC RLAREAGAVS VVDNTFLSPA 
LQNPLALGAD LVLHSCTKYL NGHSDVVAGV VIAKDPEMVT ELAWWANNIG VTGGAFDSYL 
LLRGLRTLVP RMELAQRNAQ AIVKYLQTQP LVKKLYHPSL PENQGHEIAA RQQKGFGAML 
SFELDGDEET LRRFLGGLSL FTLAESLGGV ESLISHAATM THAGMSPQAR AAAGISETLL 
RISTGIEDGE DLIADLENGF RAANKG