Gene SeAg_B4300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B4300 
Symbol 
ID6793578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp4191608 
End bp4192591 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content53% 
IMG OID642778406 
Producttrap dicarboxylate transporter, dctp subunit 
Protein accessionYP_002148985 
Protein GI197247720 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAC CTGGTTTTAT ACGTCTGGCT ACGCTGGCCT TACTCTCCAC ACTCTCTTTC 
TTCTCCCACG GCGAAACCAT TTTGCGCCTG GCCTACGCTG AAAATAGCCA GCCGGTAAAA 
GATGCGTTGC ACTTCCTGGG ACAGCAAGTT GAAGAGAAAA CGGGCGGCGA TATCAAAGTA 
CAGTACTTCC CGGACGGACA GCTTGGCGGC GAGCGCGAAC TGGTGGAGTT GACGCAGGTC 
GGCGTCGTCG ACATCACTAA AGTGTCGTCC GGGCTGATGG AGAGTTTTTC GCCTGAGTAC 
GGCGTGTTCT CACTTCCCTA CCTGTTTGCC ACCGTCGATG AATACTACCG CGTAATGGAT 
AACCCACAGG TGATGGAGCC TGTTTATCAG TCCACCGCCG CACAGGGTTT TGTCGGCGTA 
GGCTGGTATG ATTCCGGCGC GCGTAATTTT TATATGAGCA AAGCGCCGGT TAAACGCATT 
GAGGATTTAC GCGGGAAGAA GATCCGCGTC ATGCAGAGTG AGACGGCGAT CCAAACTCTC 
AAACTGCTGG GCGCTTCGCC CATCGCCATG AGCCAGGCGG AGGTCTATAC CTCGTTACAA 
CAAGGCATTC TCGACGGCGC GGAAAACAAT GAGTTCGCTC TCACCATCGC CCGCCACGGC 
GAAGTCGCCC GTTATTACAC CTACGATATG CACACCCGCA TTCCCGATAT CCTGCTAATG 
AGTACCCTCA CGCTGGAAAA GCTGACGTCG GAACAGCAGC GCATCGTCGA AGCCGCCATC 
AAGGCGTCGA TCGAATTTGA GAAAGCCGCA TGGGACAAGG AAATAGAGAA AACCAGGCTG 
GCGGCGGTAA AAGATTTCAA CGTTGAATTC TACGAGATCG ACAAAAAACC CTTCCAGAAG 
GCAGTACAGC CTATTTACGA CGGTCTGAAA AACAAACCGC GGCTTTACGG GCTGTATCAA 
CGTATCCAGA CAGCAAAAAA TTAA
 
Protein sequence
MKQPGFIRLA TLALLSTLSF FSHGETILRL AYAENSQPVK DALHFLGQQV EEKTGGDIKV 
QYFPDGQLGG ERELVELTQV GVVDITKVSS GLMESFSPEY GVFSLPYLFA TVDEYYRVMD 
NPQVMEPVYQ STAAQGFVGV GWYDSGARNF YMSKAPVKRI EDLRGKKIRV MQSETAIQTL 
KLLGASPIAM SQAEVYTSLQ QGILDGAENN EFALTIARHG EVARYYTYDM HTRIPDILLM 
STLTLEKLTS EQQRIVEAAI KASIEFEKAA WDKEIEKTRL AAVKDFNVEF YEIDKKPFQK 
AVQPIYDGLK NKPRLYGLYQ RIQTAKN