Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4297 |
Symbol | |
ID | 6796688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4188945 |
End bp | 4189616 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642778403 |
Product | oligogalacturonate-specific porin |
Protein accession | YP_002148982 |
Protein GI | 197250490 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAT CTCTTTTCTT ACTATTACCT CTTGTTGTAA CAAATGCGCA TGCAGTATAT GTCGATGTTC GTCATGAATA TCTTGATGAC AGTAAAGCTA ACTATGACCG TGCGTATATT TCTCATCGGT TTGCGAATGG TGTTGGTTTT GCGATAGAAG CTATCTCAAA ATCAGGCGGG GATGACACCA ATAAAGCGTT TAATGACCTG GAAACACAGG GCAACGAATA TACGATAAGC TACCAATTTA AAACCGGTGA TGTCGCCTGG CAACCGGGTT TCGTGCTAGA AACAGGCAAC GGTTACTCTA CCTATAAGCC TTACTTCCGC GCGACGTGGA CATTAAATGA AAGCTGGTGG GTTGGTGCGC GCTATCGTTT TGAATATGTA CGCCGTTCTT CTGATATCCG TGATGATGAT ACCATCAATC GTATGGATGT CTGGGCGGGT TATAAATGGA ACAACTTTGA CTGGACAATC GAAGGAATTT ATAAGAAAGC TGATAAATAT GATCTTTACG ATGGCGGCAA AGATAACTAT GAATATAACT TCAGAACTGC CTATATTATT GATCAATGGT CGCCATTCGT TGAGGTAGGT AATGTTTCCG TCAATAGCAA CAGCGATGAA AGACAAACCC GTTTCCGCGT GGGTATAGGC TACACATTCT AA
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Protein sequence | MRKSLFLLLP LVVTNAHAVY VDVRHEYLDD SKANYDRAYI SHRFANGVGF AIEAISKSGG DDTNKAFNDL ETQGNEYTIS YQFKTGDVAW QPGFVLETGN GYSTYKPYFR ATWTLNESWW VGARYRFEYV RRSSDIRDDD TINRMDVWAG YKWNNFDWTI EGIYKKADKY DLYDGGKDNY EYNFRTAYII DQWSPFVEVG NVSVNSNSDE RQTRFRVGIG YTF
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