Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4216 |
Symbol | trkH |
ID | 6795786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 4113409 |
End bp | 4114860 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642778327 |
Product | potassium transporter |
Protein accession | YP_002148911 |
Protein GI | 197248933 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000196268 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTTC GCGCCATTAC CCGAATCGTT GGACTACTGG TTATCTTATT TTCGGGGACA ATGATTCTCC CGGGACTGGT AGCGCTAATA TATCGTGATG GCGCAGGAAG AGCGTTCACG CAGACCTTTT TTGTCGCGCT GGCGATCGGT TCCATACTGT GGTGGCCAAA CCGTAGGGAA AAGGGCGAGC TGAAATCCCG CGAAGGATTT CTTATCGTGG TGTTGTTCTG GACCGTGCTG GGCAGCGTGG GTGCGCTGCC GTTTATTTTC TCGGAAAGCC CAAACCTCAC CATTACCGAT GCTTTTTTTG AATCGTTCTC CGGGTTAACC ACCACGGGCG CCACTACGCT GGTGGGGTTG GACTCATTAC CGCACGCCAT TCTCTTTTAT CGTCAGATGC TGCAATGGTT TGGCGGTATG GGGATCATTG TGCTGGCGGT GGCGATTCTC CCTATCCTCG GCGTCGGGGG GATGCAGCTC TATCGGGCAG AAATGCCGGG GCCGCTCAAA GATAACAAAA TGCGCCCGCG TATTGCCGAG ACGGCGAAAA CGCTGTGGCT TATCTATGTC TTGCTAACGG TAGCCTGCGC GCTGGCGCTA TGGTTTGCAG GGATGCCCGC GTTTGACGCT ATCGGACACA GCTTCTCCAC TATCGCTATC GGCGGCTTCT CAACGCATGA CGCCAGCGTA GGCTATTTTG ATAGTCCCAC TATTAATACC ATCATCGCTA TTTTCCTGCT GATCTCCGGT TGTAACTATG GCCTGCATTT CTCTTTATTA AGCGGGCGTA GCCTGAAAGT ATACTGGCGC GATCCGGAAT TCCGCATGTT CATCGGCGTA CAGTTGACGC TGGTGGTGAT CTGCACGCTG GTACTGTGGT TCCATAATAT CTACGACTCG GCGCTGACAA CGCTAAATCA GGCATTCTTC CAGGTCGTGT CGATGGCGAC AACGGCAGGA TTTACCACGG ACAGCATTGC GCGCTGGCCG CTGTTTTTGC CCGTCTTGCT GCTATGTTCC GCGTTTATTG GCGGTTGCGC CGGGTCAACG GGCGGGGGGT TAAAGGTCAT CCGTATTCTG TTGTTGTTTA AACAGGGGAA CCGCGAACTC AAACGTCTGG TGCATCCGAA TGCCGTTTAC AGTATTAAGC TGGGGAACCG GGCACTGCCA GAACGTATTC TGGAAGCCGT CTGGGGATTC TTTTCTGCCT ACGCGCTGGT ATTTATCGTC AGTATGCTGG CTATTATCGC TACAGGCGTA GATGATTTCT CGGCTTTCGC CTCGGTAGTG GCTACGCTTA ATAACCTGGG ACCGGGGCTG GGGGTGGTTG CTGATAACTT CGCCAGTATG AATCCGGTTG CGAAATGGAT ACTCATCGCC AACATGCTAT TTGGTCGTCT GGAAGTATTC ACTTTGCTGG TACTTTTTAC CCCGACTTTC TGGCGTGAAT AA
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Protein sequence | MHFRAITRIV GLLVILFSGT MILPGLVALI YRDGAGRAFT QTFFVALAIG SILWWPNRRE KGELKSREGF LIVVLFWTVL GSVGALPFIF SESPNLTITD AFFESFSGLT TTGATTLVGL DSLPHAILFY RQMLQWFGGM GIIVLAVAIL PILGVGGMQL YRAEMPGPLK DNKMRPRIAE TAKTLWLIYV LLTVACALAL WFAGMPAFDA IGHSFSTIAI GGFSTHDASV GYFDSPTINT IIAIFLLISG CNYGLHFSLL SGRSLKVYWR DPEFRMFIGV QLTLVVICTL VLWFHNIYDS ALTTLNQAFF QVVSMATTAG FTTDSIARWP LFLPVLLLCS AFIGGCAGST GGGLKVIRIL LLFKQGNREL KRLVHPNAVY SIKLGNRALP ERILEAVWGF FSAYALVFIV SMLAIIATGV DDFSAFASVV ATLNNLGPGL GVVADNFASM NPVAKWILIA NMLFGRLEVF TLLVLFTPTF WRE
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