| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4190 |
|---|
| Symbol | pldB |
|---|
| ID | 6792815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4085609 |
|---|
| End bp | 4086625 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642778302 |
|---|
| Product | lysophospholipase L2 |
|---|
| Protein accession | YP_002148886 |
|---|
| Protein GI | 197248834 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2267] Lysophospholipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCAGC AGCAAAATGA CTGGGAAACA AGAGAAAATG CGTTTGCCGC TTTTGCTATG
GGGCCGCTGA CCGATTTCTG GCGTCAGCGG GAAGAGGCAG AGTTTATCGG CGTGGGTAAC
ATTCCGGTGC GCTTTGTCCG TTTTCGAAAT GATTCCAACG ATCGGACGAT CGTCATTTGT
CCTGGCCGCA TTGAGAGTTA TGTAAAATAC GCTGAACTGG CGTATGACCT TTTTCATCTC
GGTTTTGATA TCTTCATCAT CGACCACCGT GGTCAAGGGC GCTCCGGGCG GATGTTATCG
GACCCGCATC GGGGTCATGT TGATCATTTT AACGATTATG TTGAGGACTT AGCGGCGTTC
TGGCAGCAGG AAATTGAGCC GGGGCCGTGG CGTAAGCGTT ATATCCTGGC GCACTCAATG
GGGGGCGCGA TAGCCACCCT GTTCCTGCAA CGCCATCGTG TGCGGTGCGA CGCTATTGCG
CTCACCGCGC CGATGTTTGG TATTGTGATA CGCTTGCCTT CCTTTATGGT GCGCCATATT
CTCGACTGGG CCGAGGGGCA CCAGCGTATC CGTGAAGATT ACGCTATTGG TACCGGTCAG
TGGCGGGCGT TGCCGTTTGG GATGAATGCG CTGACCCACA GCCGCCAGCG TTATCAGCGC
AACTTACGAT TTTATGCCGA CGAGCCGCAG CTGCGCGTTG GCGGCCCCAC CTGGCATTGG
GTACGCGAAG GCATTCTGGC GGGTGAGCAG GTTCTGGCTG GGGCGAGCGA TGACACGACG
CCTACGCTAC TGATTCAGGC GGAAGAAGAG CGGGTAGTGG ATAACCGCAC CCACGATCGT
TTTTGTGAAA TTCGCGCCGC GGCGGGATAC CCTTGTGAAG GGGGAAAACC GCTGGTTATC
AAAGGCGCGT ACCATGAGAT CCTTTTTGAA AAGGACGCCA TGCGCTCAGT CGCGCTTAAC
GCCATTGTTG AATTTTTCAA CAAGCCTAAT TTATCCAGCG GAAATCGCTT TGCTTAG
|
|---|
| Protein sequence | MFQQQNDWET RENAFAAFAM GPLTDFWRQR EEAEFIGVGN IPVRFVRFRN DSNDRTIVIC
PGRIESYVKY AELAYDLFHL GFDIFIIDHR GQGRSGRMLS DPHRGHVDHF NDYVEDLAAF
WQQEIEPGPW RKRYILAHSM GGAIATLFLQ RHRVRCDAIA LTAPMFGIVI RLPSFMVRHI
LDWAEGHQRI REDYAIGTGQ WRALPFGMNA LTHSRQRYQR NLRFYADEPQ LRVGGPTWHW
VREGILAGEQ VLAGASDDTT PTLLIQAEEE RVVDNRTHDR FCEIRAAAGY PCEGGKPLVI
KGAYHEILFE KDAMRSVALN AIVEFFNKPN LSSGNRFA
|
|---|
| |