Gene SeAg_B4188 details

Gene Information

• Locus tag: SeAg_B4188
• Symbol: rhtC
• ID: 6793933
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 4084218
• End bp: 4084838
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642778300
• Product: threonine efflux system
• Protein accession: YP_002148884
• Protein GI: 197247794
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein
• TIGRFAM ID: [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGATGC TATTTTTCAC CGTGGCAATG GTGCACATCG TTGCGCTAAT GAGCCCCGGC 
CCCGACTTTT TCTTCGTGTC TCAAACTGCT GTCAGCCGTT CGCGTAAAGA AGCGATGATG 
GGCGTACTGG GCATCACCTG CGGCGTGATG GTATGGGCGG GCGTGGCGCT GCTTGGCCTG 
CATCTCATCA TCGAAAAAAT GGCCTGGCTG CATACGATCA TTATGGTAGG TGGCGGCCTG 
TACCTGTGCT GGATGGGCTA TCAGATGCTG CGCGGCGCGC TGAAAAAACA GGATGCGGCG 
GCGTCTTCTC CGCACATTGA ACTGGCGCAG AGCGGGCGCA GTTTTCTCAA AGGGCTGTTG 
ACCAATCTGT CGAATCCTAA AGCGATTATC TATTTTGGTT CCGTTTTTTC ACTGTTTGTC 
GGCGATAACG TCGGCGCTGC GGCGCGCTGG GGTATTTTCG CGTTAATTAC CCTGGAAACG 
CTGGCCTGGT TTACCGTAGT CGCCAGCCTG TTCGCGCTGC CGAAAATGCG CCGCGGCTAT 
CAGCGTCTGG CGAAATGGAT TGATGGTTTT GCCGGCGCTC TGTTTGCGGG CTTTGGTATT 
CACCTGATTA TTTCGCGCTA A 

 

Protein sequence

MMMLFFTVAM VHIVALMSPG PDFFFVSQTA VSRSRKEAMM GVLGITCGVM VWAGVALLGL 
HLIIEKMAWL HTIIMVGGGL YLCWMGYQML RGALKKQDAA ASSPHIELAQ SGRSFLKGLL 
TNLSNPKAII YFGSVFSLFV GDNVGAAARW GIFALITLET LAWFTVVASL FALPKMRRGY 
QRLAKWIDGF AGALFAGFGI HLIISR