| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4151 |
|---|
| Symbol | wecE |
|---|
| ID | 6793138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 4053410 |
|---|
| End bp | 4054540 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642778266 |
|---|
| Product | TDP-4-oxo-6-deoxy-D-glucose transaminase |
|---|
| Protein accession | YP_002148854 |
|---|
| Protein GI | 197248155 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR02379] TDP-4-keto-6-deoxy-D-glucose transaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.521456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCTT TTAATGCGCC GCCGGTGGTG GGAACCGAAC TCGAATACAT GCAGTCTGCA
ATGAGCAGCG GCAAACTGTG CGGCGACGGC GGCTTTACGC GTCGTTGCCA GCAGTGGCTG
GAGCAACATT TCGGCAGCGC GAAGGTGTTG CTAACGCCTT CCTGTACCGC ATCGCTGGAG
ATGGCGGCTC TGTTGTTGGA TATTCAGCCC GGCGATGAAG TGATCATGCC GAGCTTTACG
TTTGTCTCCA CCGCTAACGC TTTTGTCCTG CGCGGCGCGA AAATTGTATT TGTCGATATT
CGTCCGGATA CGATGAATAT TGACGAAACG CTGATTGAGG CGGCGATTAC TGATAAAACC
CGCGCTATCG TGCCGGTACA CTACGCTGGC GTCGCTTGTG AAATGGATGT CATCATGGCG
CTGGCGGATA AGTATAATCT GTTCGTTGTC GAGGATGCCG CCCAGGGTGT GATGTCCACG
TACAAAGGAC GCGCGTTAGG GACGATCGGT CACATCGGCT GTTTTAGCTT CCATGAAACC
AAAAATTACA CCGCTGGCGG CGAAGGCGGC GCGACGCTGA TCAACGATCG TACGCTGATT
GAACGCGCGG AGATCATCCG CGAAAAAGGC ACCAACCGTA GCCAGTTCTT CCGTGGTCAG
GTGGATAAAT ACACCTGGCG GGATATCGGC TCCAGTTATT TGATGTCCGA TCTGCAGGCT
GCCTATCTGT GGGCGCAACT GGAGGCCGCC GATCGTATCA ATCAACAGCG TCTGTCGCTG
TGGCAGACTT ACTACGATGC GTTAACGCCG CTGGCGCGCG CCGGGCGTAT CGAGCTGCCT
TCTATTCCGG AAAACTGCGG GCATAATGCC CATATGTTTT ACATCAAACT GCGGGATATC
GCCGATCGCA GCGCGCTGAT TAATTTCCTG AAAGAGGCGG AAATCATGGC GGTATTCCAT
TACATTCCGC TGCATGATTG TCCGGCGGGC GATAAATTCG GCGAGTTTAT CGGGGACGAT
GTCTACACCA CAAAAGAGAG CGAACGTTTG CTGCGTCTGC CGCTGTTTTA TAACCTTGCG
CCCGTCGATC AACGAACGGT GATTACTACC TTGCTAAATT ATTTCTCCTG A
|
|---|
| Protein sequence | MIPFNAPPVV GTELEYMQSA MSSGKLCGDG GFTRRCQQWL EQHFGSAKVL LTPSCTASLE
MAALLLDIQP GDEVIMPSFT FVSTANAFVL RGAKIVFVDI RPDTMNIDET LIEAAITDKT
RAIVPVHYAG VACEMDVIMA LADKYNLFVV EDAAQGVMST YKGRALGTIG HIGCFSFHET
KNYTAGGEGG ATLINDRTLI ERAEIIREKG TNRSQFFRGQ VDKYTWRDIG SSYLMSDLQA
AYLWAQLEAA DRINQQRLSL WQTYYDALTP LARAGRIELP SIPENCGHNA HMFYIKLRDI
ADRSALINFL KEAEIMAVFH YIPLHDCPAG DKFGEFIGDD VYTTKESERL LRLPLFYNLA
PVDQRTVITT LLNYFS
|
|---|
| |