Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeAg_B4085 |
Symbol | |
ID | 6793652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
Kingdom | Bacteria |
Replicon accession | NC_011149 |
Strand | + |
Start bp | 3984762 |
End bp | 3986552 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642778201 |
Product | HTH-type transcriptional regulator SgrR |
Protein accession | YP_002148795 |
Protein GI | 197251135 |
COG category | [R] General function prediction only |
COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTCATTC CCGTTCGGGA AATTTCACCT TTTATGACAA CCCGGCACAC TGAACAAAAA TACTTAAAGC TACTCCAGCA CTATGGCGAC AAGCCTGTTA GCGTGACGCT ACAGGAGCTG GCGGATGTGT TGTTCTGCAC CCGGCGGCAT ATGCGTAATC TGTTGCTTCA GATGCAGGAG GCAAAGTGGC TCATCTGGCA ATCACAGGCC GGACGTGGGC ATCGCGCCCG GCTTCACCTG CGCTATAAAC CAGAACAGCT GTTAAGCGAA AAGGCGGAGC AGTTGCTGGA GTCTGGTCAT GTTGATCAGG CCATTCAACT GCTGGGTAAA AATAAGCACC AGGTGGCGCA ACTGCTGCGT TCAAAGCTGG GCTATAGCGT GCGGGCAGAC TATCAGCGGC TGTGCATCCC CTATTACCGG ACAATGCCGT CACTGTGCCC CGGCATACCG TTGCGTCGCT CTGAGCAGCA TCTGGTCAGG CAGATTTTTA GCGGCCTGAC GCGCATAAAT GAGGAAAAAG GTGAAGTCGA AGCCGATCTT GCCCACCACT GGCGGCAGAT TGATCCACTG CGCTGGCGTT TTTATCTGCG CCCCGCCGTC CTCTGGCATG ATGGTCAGGA GCTGACGATC GACGCGGTTA TCGCTTCACT GACCCGCAGC GCTAAGCTGC CGTTGTTCTC GCACTTGCAG ACCATTCAGG CCACCGGGCC GCTGAGCCTT GAAATTACGC TGGCGCACCC GGATAACCGA CTGCCGCTGC TGCTCAGCCA TATTGATGCC ATGATCCTAC CGCCTGACCA TACACAACGC GCTGATTTCC CGGCACATCC TGTGGGGACT GGCCCTTATG AGGTGGTGGA AAACAATGGC TTTCATCTGC AAATGAAGGC CTTTGACCAC TATTTCGGCC TGCGCGGGCT GCTGGATGAA GTGGAGGTCT TTATCTGGCC GAATTTAACG GAGACAGACA ACCTGGCGGA ATCGCTGTCG GATAACGACA CGGCAGCCTG GCTCAGCTCC AGCCTGAGCG ATGAGGATTA CGTTTCCGGA CGGCTTAGCC AGGTATCAGG CAAACCTTCT GACAACCTGC GCGAGATGTT TCTTGAGCGT GGAGGATATT TTTTATTATG CGACAGCCGC TCCCCGCACT GGCATACCGC CGAACATCGC CGCTGGCTAC GGGAAACACT CAGCCCTTAC GCCATACTCC AGCATCTGAG TGAGGCAATT CGCCCCTTCT GGGTACCGGG CGGCAGCCTG CTGTCCTCCT GGTTTCATAC TATTGAGGCG GGCCCGGCCT GTTCACCTTT TATCTCGTCG TCGCCCTACG CAAAACTGCG TCTGGCCTAT CACGATCAGC ACCCTGAATT TCCAATGCTC CTGGATATCA TGCAAGAGAT CATGCGCCAG CAGGGCATTT TACTTGAGGG CGTTGAGCTG AATTATGATG ACTGGGCGAA TGGCAAAGCC AATGTGGATC TCTGGCTGGG GACGGTCAAT TTCCCCATTC CCGAAGAGTG GAACGTCGGT ACATGGCTAC TGGGCTCCCC TTTACTGCGC CATGCCATCA GCGGTGGGGA TGATGCGCTG CTGGCCCAAT GGGAAACCCA GTGGCATGCC GAAACCATCA GCGCGGAACA ACTGGTCAGG GAAACCACCC GTTCAGGCTG GCTACAGCCG CTGTTTCACC ACTGGATGCG ACTCAAAAGC CCCGACCGGG CCAGGGGGAT CCACCTGAAT AACCTGGGAT GGTTTGATTT CCGATCCACC TGGATTGAGC CAGGGCCTTA A
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Protein sequence | MLIPVREISP FMTTRHTEQK YLKLLQHYGD KPVSVTLQEL ADVLFCTRRH MRNLLLQMQE AKWLIWQSQA GRGHRARLHL RYKPEQLLSE KAEQLLESGH VDQAIQLLGK NKHQVAQLLR SKLGYSVRAD YQRLCIPYYR TMPSLCPGIP LRRSEQHLVR QIFSGLTRIN EEKGEVEADL AHHWRQIDPL RWRFYLRPAV LWHDGQELTI DAVIASLTRS AKLPLFSHLQ TIQATGPLSL EITLAHPDNR LPLLLSHIDA MILPPDHTQR ADFPAHPVGT GPYEVVENNG FHLQMKAFDH YFGLRGLLDE VEVFIWPNLT ETDNLAESLS DNDTAAWLSS SLSDEDYVSG RLSQVSGKPS DNLREMFLER GGYFLLCDSR SPHWHTAEHR RWLRETLSPY AILQHLSEAI RPFWVPGGSL LSSWFHTIEA GPACSPFISS SPYAKLRLAY HDQHPEFPML LDIMQEIMRQ QGILLEGVEL NYDDWANGKA NVDLWLGTVN FPIPEEWNVG TWLLGSPLLR HAISGGDDAL LAQWETQWHA ETISAEQLVR ETTRSGWLQP LFHHWMRLKS PDRARGIHLN NLGWFDFRST WIEPGP
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