| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4051 |
|---|
| Symbol | torC |
|---|
| ID | 6793643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3947845 |
|---|
| End bp | 3949029 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642778167 |
|---|
| Product | trimethylamine-N-oxide reductase c-type cytochrome TorC |
|---|
| Protein accession | YP_002148761 |
|---|
| Protein GI | 197251755 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
|---|
| TIGRFAM ID | [TIGR02162] trimethylamine-N-oxide reductase c-type cytochrome TorC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAAAC TCTGGAGAGC GCTACTCAGG CCAAGCGCCC GTTGGTCGAT ACTGGCGCTG
GTCATTGTCG GGATTGTGAT CGGCGTTGCG CTGATCGTGT TACCTCACGT CGGTATCAAA
CTGACCAGTA CGACAGAGTT TTGCGTCAGC TGCCATAGTA TGCAGCCGGT GTATCAGGAA
TATAAACAGT CCGTACATTT CCAGAACGCT TCCGGCGTAC GCGCGGAATG CCACGATTGC
CATATCCCCC CTGATATTCC AGGCATGGTG AAACGTAAGC TGGAAGCCAG CAACGATCTT
TACCAGACAT TTATCGCCCA CTCGATTGAT ACCCCGGAAA AATTTGAAGC CAAACGCGCC
GAGCTTGCCG AGCGTGAATG GGCGCGCATG AAAGAGAATA ACTCCGCGAC CTGTCGTTCC
TGCCATAACT ACGATGCGAT GGATCACGCG AAACAGAACC CGGAAGCGGC GCGGCAAATG
AAAATCGCCG CGAAAGAAAA TCAATCCTGC ATCGACTGTC ATAAAGGGAT TGCCCACCAG
CTACCGGATA TGAGCAGCGG TTTCCGCAAA CAGTTTGATG AACTGCGCGC CAGCGCCAGT
ACGCATAATG ACGGCGATAC GCTCTATTCG CTGGATATCA AGCCGATTTA CGCCGCTAAA
GGCGATAAAG AACCGGCAGG TTCGCTGTTA CCTGCTTCTG AAGTGACAGT CCTTAAACGG
GACGGTGACT GGCTGCAAGT GCAAATCGAA GGCTGGACGG AGACGGACGG TCGCCAGCGC
GTGCTGACGC AGTTGCCCGG TAAACGTATT TTTGTCGCCT CGATTCGCGG CGATGTGCAA
CAGCATGTGA AAACGCTGGA AGAGACCACC GTCGCGGCGA CCAATACTCA GTGGAGCAAA
TTACAGGCAA CTGCGTGGAT GCAAAAAGGC GACATGGTAA ATGACATTAA ACCGATTTGG
GCCTATGCCG ACTCCCTCTA TAACGGCACC TGTAATCAGT GTCACGGCGC GCCGGACAAA
GCGCACTTTG ACGCTAACGG CTGGATCGGC ACGCTCAACG GCATGATCGG TTTCACCAGT
CTGGATAAGC GTGAAGAACG TACCTTGTTG AAATATCTCC AGATGAATGC GTCTGATACC
ACCAACACGC CGCACAGCGA TAAGGGAGAA CACAATGAAA AATAA
|
|---|
| Protein sequence | MRKLWRALLR PSARWSILAL VIVGIVIGVA LIVLPHVGIK LTSTTEFCVS CHSMQPVYQE
YKQSVHFQNA SGVRAECHDC HIPPDIPGMV KRKLEASNDL YQTFIAHSID TPEKFEAKRA
ELAEREWARM KENNSATCRS CHNYDAMDHA KQNPEAARQM KIAAKENQSC IDCHKGIAHQ
LPDMSSGFRK QFDELRASAS THNDGDTLYS LDIKPIYAAK GDKEPAGSLL PASEVTVLKR
DGDWLQVQIE GWTETDGRQR VLTQLPGKRI FVASIRGDVQ QHVKTLEETT VAATNTQWSK
LQATAWMQKG DMVNDIKPIW AYADSLYNGT CNQCHGAPDK AHFDANGWIG TLNGMIGFTS
LDKREERTLL KYLQMNASDT TNTPHSDKGE HNEK
|
|---|
| |