| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B4046 |
|---|
| Symbol | ccmB |
|---|
| ID | 6795737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3941809 |
|---|
| End bp | 3942465 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642778162 |
|---|
| Product | heme exporter protein CcmB |
|---|
| Protein accession | YP_002148756 |
|---|
| Protein GI | 197247463 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 49 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGTG TCTTCTGTCT CGAACTGCGC GTGGCGTTCC GCCACGGCGC GGACATCGCC
GGCCCGCTGT GGTTCTTCCT GATGGTCATC ACCCTGTTTC CGTTAAGCGT CGGGCCGCAG
CCGCAGCTGC TGGCGCGTAT CGCGCCGGGC ATCATCCAGG TGGCGGCGCT GCTGGCCTCG
CTGCTGGCGC TGGAGCGGCT GTTTCGCGAC GACCTGCAGG ACGGCAGCCT GGAGCAGCTG
ATGCTGCTGC CGGTGCCGCT GCCGGCGGTG GTGCTGGCGA AGGTGCTGGC CCACTGGGCG
GTGACCGGCC TGCCGCTGAT TATGCTCTCC CCGCTGGTGG CGCTGCTGCT GGGGATGGAC
GTGTACGGCT GGAAAATCAT GGCGCTGACG CTGCTGCTCG GCACGCCGGC GCTGGGGTTT
CTCGCCGCGC CGGGCGTTGC GCTGACGGCC GGGCTGCGGC GCGGCGGCGT CCTGCTGGGC
ATTCTGGTGC TGCCGCTGAG TGTCCCGGTG CTGATTTTCG CCGCCGCGGC GATGGACGCG
GCATCGATGC ATTTACCCGC TGACGGCTAT CTGGCGGTGC TGGGGGCGCT GCTGGCGGGC
AGCGCGACGT TAAGCCCGTT CGCCACCGCG GCGGCGCTGC GCCTCAGCGT GCAGTAG
|
|---|
| Protein sequence | MWRVFCLELR VAFRHGADIA GPLWFFLMVI TLFPLSVGPQ PQLLARIAPG IIQVAALLAS
LLALERLFRD DLQDGSLEQL MLLPVPLPAV VLAKVLAHWA VTGLPLIMLS PLVALLLGMD
VYGWKIMALT LLLGTPALGF LAAPGVALTA GLRRGGVLLG ILVLPLSVPV LIFAAAAMDA
ASMHLPADGY LAVLGALLAG SATLSPFATA AALRLSVQ
|
|---|
| |