| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3981 |
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| Symbol | |
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| ID | 6793272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 3879256 |
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| End bp | 3882123 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642778098 |
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| Product | outer membrane autotransporter barrel domain |
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| Protein accession | YP_002148692 |
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| Protein GI | 197247791 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAACTC CCCAAAATTA CTCATTCATC GCCATAGCGG TATCAGCAGC GTTAGCCTCT
ATGGTATTTC CCTCCCAGGC GGCCTGGGTT GACGTTGATA GTCTGCCATC CAGTGGGCTG
GTCAGCCAGT TGCCGCCGGA ATTACAGGCT ATTATTCCCG CTCAGGCCAG TACCGGTTTC
ACCAAAGTCG GTACTATGCC CAACTACGTT TATCAGTGGA ACACCGGCAC CATCCCGGTT
TATGGCAATG GCCTCACGCT TAATGGGCCG GGTGCGGAGG CGTTTGAACA CACTGTCACG
GTTATTCAAA ACAGCGGGAC GGGAAGTCCG GGCGTGATTT TTGGCAACGA CCTGACCATT
CGGACGCAGT CGGCGAATGC CGCGAATAAT GGTAGAGACG TCGATGGCAT CCGTACTCAC
GGCGCAAATA CTCCGGATAA CCCGGTATTT ATTATTACCG GTGACCGTAC CAACATCTAC
GTGGATGGTC AGGATGGTGA CGGTATTAAC GCCGGATATA ACTCACTGGG CCAGGGTTGG
ACCGGATCGG CCAATATTTA CGTCGGCGAC GATCTGTATA TCAAAACAAC AGGTAGCCAG
GGACGTGGAA TTACAGCCAA CGCCATGCGG GATGCGTCAC GTGCCAAAAA TACGATTGTC
GTCGGCAATC GTGCACATAT TGTTACTACC GGCGACAGTT CGGAGGGGCT GCGTACCGGA
CAAAGCGGTT CGTTGATTCG TCTGGGTGAC GATGCAACCA TCGAAACCTC CGGCGCATCC
TCAACGGGGA TTTACGCAGC ATCCTCCTCC AGAACCGAGC TTGGCAACAA CGCTACTATT
ACGGTGAACG GTGCCAGCGC ACACGCGGTA TATGCAACTA ACGCTACCGT TAATTTGGGA
GAGAATGCCA CTATTAGCGT TAACAGCGCC AGTAAGGCTG CATCCTATAG TAAAGCCCCT
GCCGGTTTAT ACGCCCTCTC CCGAGGCGCC ATTAATCTGG CAGGCGGTGC GGCTATTACT
ATGGCGGGCG ATAACAGTAG CGAAAGTTAC GCCATCAGCA CGGAAACTGG CGGCATTGTT
GACGGTTCTT CAGGAGGTCG TTTCGTCATC GACGGTGATA TTCGTGCTGC TGGCGCCACC
GCTGCCAGCG GTACGCTACC GCAGCAGAAC AGTACGATTA AGCTCAATAT GACGGACAAC
TCGCGATGGG ACGGGGCGTC GTACATCACC AGCGCTACGG CGGGCACAGG CGTTATCTCT
GTACAAATGA GCGATGCGAC CTGGAATATG ACCAGCAGCT CAACGCTCAC TGACCTGACG
CTGAATAGTG GCGCAACCAT TAACTTCAGC CATGAAGATG GCGAGCCATG GCAAACGCTC
ACCATCAATG AAGATTATGT AGGCAACGGC GGTAAGCTGG TCTTTAATAC TGTGCTCAAC
GATGATGATT CCGAAACGGA CAGGCTGCAG GTTCTCGGCA ATACTTCAGG CAACACATTT
GTTGCAGTAA ATAATATTGG AGGAGCCGGG GCGCAAACCA TTGAAGGTAT TGAAATTGTT
AACGTTGCTG GTAATTCTAA CGGTACTTTC GAAAAAGCAA GCCGTATTGT TGCCGGAGCC
TATGACTACA ACGTGGTGCA GAAAGGTAAA AACTGGTATC TGACCAGCTA CATTGAGCCG
GACGAACCGA TTATTCCTGA TCCGGTAGAC CCTGTTATCC CTGACCCTGT CGTTCCCGAT
CCGGTGGACC CTGATCCAGT AGACCCGGTT ATCCCTGACC CTGTTATTCC CGATCCGGTG
GACCCTGATC CTGTAGACCC TGAGCCAGTA GACCCGGTCA TCCCTGATCC GACAATTCCT
GACATAGGGC AATCTGACAC ACCGCCGATA ACAGAACATC AGTTCCGTCC GGAAGTGGGC
AGCTATCTTG CCAACAACTA TGCGGCAAAT ACGCTGTTCA TGACGCGTCT CCATGACCGT
CTGGGTGAAA CCCAGTACAC CGACATGCTG ACGGGTGAGA AGAAGGTCAC CAGCCTGTGG
ATGCGTAACG TCGGCGCCCA TACTCGCTTC AACGATGGCA GCGGGCAGCT AAAAACCCGC
ATCAACAGCT ATGTGTTACA AGTGGGAGGC GATCTGGCAC AGTGGAGCAC TGACGGTCTT
GACCGTTGGC ATATTGGTGC AATGGCAGGT TATGCCAACA GCCAGAACCG CACGCTGTCG
TCCGTGAGTG ACTATCATTC CCGTGGTCAA GTCACCGGTT ACAGCGTCGG CCTTTACGGC
ACCTGGTATG CTAACAATAT CGATCGGTCT GGGGCTTATG TGGATACCTG GATGCTGTAC
AACTGGTTTG ATAACAAGGT CATGGGTCAG GATCAGGCCG CTGAGAAATA TAAATCCAAA
GGAATTACCG CCTCGGTTGA AGCCGGTTAC AGCTTCAGGT TAGGTGAAAG CGCGCATCAA
AGCTACTGGT TGCAGCCCAA AGCGCAGGTG GTATGGATGG GCGTGCAGGC TGACGACAAT
CGCGAAGCCA ATGGTACCCT CGTCAAGGAT GATACCGCCG GTAATCTGCT AACCCGCATG
GGCGTAAAAG CCTATATTAA CGGCCACAAT GCTATTGATG ACAATAAATC TCGAGAGTTC
CAGCCGTTCG TGGAGGCGAA CTGGATCCAT AATACGCAGC CTGCCAGCGT GAAGATGGAC
GATGTCAGCA GCGATATGCG TGGTACAAAA AATATTGGTG AACTGAAAGT GGGTATTGAA
GGGCAAATTA CCCCGCGCCT GAACGTATGG GGTAACGTGG CGCAGCAGAT AGGTGACCAG
GGCTATAGTA ATACCCAAGG CCTACTGGGG GTTAAATACA GTTTTTGA
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| Protein sequence | MPTPQNYSFI AIAVSAALAS MVFPSQAAWV DVDSLPSSGL VSQLPPELQA IIPAQASTGF
TKVGTMPNYV YQWNTGTIPV YGNGLTLNGP GAEAFEHTVT VIQNSGTGSP GVIFGNDLTI
RTQSANAANN GRDVDGIRTH GANTPDNPVF IITGDRTNIY VDGQDGDGIN AGYNSLGQGW
TGSANIYVGD DLYIKTTGSQ GRGITANAMR DASRAKNTIV VGNRAHIVTT GDSSEGLRTG
QSGSLIRLGD DATIETSGAS STGIYAASSS RTELGNNATI TVNGASAHAV YATNATVNLG
ENATISVNSA SKAASYSKAP AGLYALSRGA INLAGGAAIT MAGDNSSESY AISTETGGIV
DGSSGGRFVI DGDIRAAGAT AASGTLPQQN STIKLNMTDN SRWDGASYIT SATAGTGVIS
VQMSDATWNM TSSSTLTDLT LNSGATINFS HEDGEPWQTL TINEDYVGNG GKLVFNTVLN
DDDSETDRLQ VLGNTSGNTF VAVNNIGGAG AQTIEGIEIV NVAGNSNGTF EKASRIVAGA
YDYNVVQKGK NWYLTSYIEP DEPIIPDPVD PVIPDPVVPD PVDPDPVDPV IPDPVIPDPV
DPDPVDPEPV DPVIPDPTIP DIGQSDTPPI TEHQFRPEVG SYLANNYAAN TLFMTRLHDR
LGETQYTDML TGEKKVTSLW MRNVGAHTRF NDGSGQLKTR INSYVLQVGG DLAQWSTDGL
DRWHIGAMAG YANSQNRTLS SVSDYHSRGQ VTGYSVGLYG TWYANNIDRS GAYVDTWMLY
NWFDNKVMGQ DQAAEKYKSK GITASVEAGY SFRLGESAHQ SYWLQPKAQV VWMGVQADDN
REANGTLVKD DTAGNLLTRM GVKAYINGHN AIDDNKSREF QPFVEANWIH NTQPASVKMD
DVSSDMRGTK NIGELKVGIE GQITPRLNVW GNVAQQIGDQ GYSNTQGLLG VKYSF
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