| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3974 |
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| Symbol | |
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| ID | 6797141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 3872279 |
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| End bp | 3874879 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642778093 |
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| Product | putative outer membrane usher protein |
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| Protein accession | YP_002148687 |
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| Protein GI | 197249637 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.183336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTACACCT TTATCAATTG CCCTCATCCC TTATCGCGCA CTACCATTGC TATCTGCCTG
GCATTGTGTG CTGTTAATAG GGGCTATGCT GCGGAAAGCA TTGAGTTTGA TGAAACTTTT
CTAATGGGTG ATGGTAAGTC GTCTATTGAT ATTAGCCGCT ATGCCGACGG TAACCCTACA
CCGCCGGGGG TATACAATGT CAGCGTTTTT GTTAATGATA AAATCACAAC TAATCTGGAA
ATTCCGTTTA TTGATGTCGG AAAAAATGAT GCTGAAGCCT GTATCAGCAA AAAAAATCTT
GCGCAGTTGC ATATTAATCA GCCTGAGAAG ATAAAAAATA GCGATATTTT GCTAAAGAAA
GAGGATGAAA ATAGCGATTG CCTGAATCTG ACAACGCTAA TAGACAATTC GAATATTAGC
TACGATAGCA GCGATCAACG TTTATACATT ACTGTACCGC AAGCCTGGCA GAATCGTAGC
TATCAAGGTT ATGTCGACCC TTCATTGTGG GACAATGGGA TTAATGCCGC CACTTTATCT
TATTCACTCA ATGCCTATCA CAGTGAATAT GACAATGGAA ATAATGACAC CTTTTATGGT
GCATTTAACA GCGGTGTTAA CCTTGCGGGT TGGCGCTTTC GTGCCACCGG TAACTATAAC
TGGGCCAAAA ATGGTGGTAG TAACCTCGAT TTTCAGAACC GCTACGTTCA GCGTGATATT
ACCGCATTGC GATCTCAGCT CATTATGGGT GAGGCCTATA CGACGGGCGA AACCTTTGAC
TCGGTTAATA TTCGCGGTGC TCGCCTCTAT AGTGACAGCC GAATGTTGCC ATCCTCGCAG
GCTAGCTATG CGCCTATTAT TCGAGGAGTT GCTAACAGCA ACGCCAGGGT CACTATTACC
CAGGGGGGGT ACAAAATCTA TGAAACTACC GTACCGCCAG GAGCCTTTAT CATTGACGAT
CTTAGCCCAT CCGGTTTCGG TAGCGATTTG ATCGTTACTA TTGAAGAGGC TGACGGCTCC
AGGCGAACCT TTAGCCAGCC GTTTTCTTCA GTGATGCAGA TGCAGCGACC TGGCGTCGCC
CGCTGGGATT TTAGTATTGG GCAGATGAAA GACGACAGCC TGCGTCATGA ACCTAATTTG
ATTCAGGGAT CGTTTTACTA CGGTATCAAC AACTATGTGA CTGGTTATGC AGGCCTGCAA
GTCACCGATA ATGATTACTC AGCTGGGTTA TTAGGTGTGG GGATTAACAC ACCATTTGGC
GCCATTGCAG TGGATGTCAC CCAATCGCAG GCGGAAATCA CCGATGATGA GTCTTATGCC
GGACAGAGTT ACCGCCTGAC GTGGAACAAA CTGCTGGAGC CGACAGAGAC CTCGATCAAC
GTTGCTGCTT ATCGCTATTC TACCCGAAAA TATCTTGGGC TGAGCGATGC ACAACGCCTG
ATTGATGATG CGGCACATGG CGTGGTGAGT ACGAAAATGA ATACTTACGA GCGACTCAAA
AATCAGTTTA CCGTCAGTAT CAGCCAGCCG TTGCAATTTG AGAAAGAGGA TTACGGTTCA
TTCTATCTTT CCGGATCCTG GAGTGATTAT TGGGCGGGTG AGCATAGTCG CAGTGAGTAC
AACGTCGGCT ATAGCAAAGG GTTCAGTTGG GGGAGTGCGG GTATTACCGT TCAGCGTACA
TGGAACGAAT ATGGTGATAA AGACGATGCG ATGTATATTA ACTTTAGCAT TCCATTGAGT
AATCTTTTTG GTGGTACTTA CCGCCGTTCA GGTTTTACCA GCCTTAACGC CAATATTAAT
ACTGATTTTA ACGGCACCCA TATGGTGAAT ATGAACTCAA GCGGTAATAG CGAAGATAAT
TTGCTGAATT ACAGTGTTAA CACCGGTTAT ACGATGAATA AGACCGGTAG CGATCTTGCC
TCAGTAGGCG GTTATGCCAG CTATGATTCA CAATGGGGCA GTTGGTCTGC ATCCAGCTCA
TTTGATACTG ATAAGAGTCG ACAATATTCA CTGAGTACAG ATGGTGGTTT TGTGCTGCAT
AGCGGTGGTC TGACCTTCAG TAATGACAGT TTTAGCTCCA GCGACACCAT AGTGCTGGTG
AAAGCGCCAG GGGCCAAAGG TGCACGTATT AACAGTAGCG GCAGTAGCGT AGACCGTTGG
GGCTACGGTG TAACCTCTTC GCTGTCACCA TACCGTGAAA ATACCATTTC ACTGGATATT
GAGGACATGG ATGGTGACGT GGAACTGAAA AGTACCAGTA CCATTGCCGT ACCGCGCGAT
GGCGCGATTC TCTTCGCCAA CTTCGAAACC GACCAGGGGC GTTCAGCCAT CATAAATATG
AGCCGCAGCG ATAATAAGAC ATTGCCGTTT GCTGCTGAGG TTTATGAAGG TGATGCGCCA
ATTGGCAATA TGGGCCAGGA TGGTCAGGCA TTTGTGCGTG GTATTAACGA TGCTGGTGAA
CTCATCGTTC GTTGGTATGA AGAGGGTCGG CCGCAGTCCT GTCGCGCAGC CTATCAATTC
CCGGCTCAGC CAGCCACTCT ACCGGGGAGT CAGACATTGG TGTTGAGTAA TGTCATCTGC
CGTATCTCCA ACCGTAACTA A
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| Protein sequence | MYTFINCPHP LSRTTIAICL ALCAVNRGYA AESIEFDETF LMGDGKSSID ISRYADGNPT
PPGVYNVSVF VNDKITTNLE IPFIDVGKND AEACISKKNL AQLHINQPEK IKNSDILLKK
EDENSDCLNL TTLIDNSNIS YDSSDQRLYI TVPQAWQNRS YQGYVDPSLW DNGINAATLS
YSLNAYHSEY DNGNNDTFYG AFNSGVNLAG WRFRATGNYN WAKNGGSNLD FQNRYVQRDI
TALRSQLIMG EAYTTGETFD SVNIRGARLY SDSRMLPSSQ ASYAPIIRGV ANSNARVTIT
QGGYKIYETT VPPGAFIIDD LSPSGFGSDL IVTIEEADGS RRTFSQPFSS VMQMQRPGVA
RWDFSIGQMK DDSLRHEPNL IQGSFYYGIN NYVTGYAGLQ VTDNDYSAGL LGVGINTPFG
AIAVDVTQSQ AEITDDESYA GQSYRLTWNK LLEPTETSIN VAAYRYSTRK YLGLSDAQRL
IDDAAHGVVS TKMNTYERLK NQFTVSISQP LQFEKEDYGS FYLSGSWSDY WAGEHSRSEY
NVGYSKGFSW GSAGITVQRT WNEYGDKDDA MYINFSIPLS NLFGGTYRRS GFTSLNANIN
TDFNGTHMVN MNSSGNSEDN LLNYSVNTGY TMNKTGSDLA SVGGYASYDS QWGSWSASSS
FDTDKSRQYS LSTDGGFVLH SGGLTFSNDS FSSSDTIVLV KAPGAKGARI NSSGSSVDRW
GYGVTSSLSP YRENTISLDI EDMDGDVELK STSTIAVPRD GAILFANFET DQGRSAIINM
SRSDNKTLPF AAEVYEGDAP IGNMGQDGQA FVRGINDAGE LIVRWYEEGR PQSCRAAYQF
PAQPATLPGS QTLVLSNVIC RISNRN
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