Gene SeAg_B3967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3967 
Symbol 
ID6794241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp3866243 
End bp3867625 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content55% 
IMG OID642778086 
Productputative transporter 
Protein accessionYP_002148681 
Protein GI197247427 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID[TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.286007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTG AGATTCTCTC CGTTAAGGAG AAGATTGGCT ATGGTATGGG CGATGCCGCG 
AGCCACATCA TCTTTGATAA CGTCATGTTA TATATGATGT TCTTCTATAC CGATATTTTC
GGCATTCCCG CTGGTTTTGT TGGCACCATG TTTTTACTGG CGCGTGCGCT TGATGCCATC
TCCGACCCTT GCATGGGCCT GCTGGCCGAC CGTACCCGCT CTCGCTGGGG CAAATTCCGA
CCCTGGGTGC TGTTTGGCGC GTTGCCGTTT GGTATCGTTT GTGTGCTGGC TTATAGCACG
CCGGATCTCA GTCTGAACGG CAAAATGATT TATGCCGCCA TCACCTACAC GTTGCTCACC
CTTCTGTACA CTGTGGTCAA CATCCCTTAC TGCGCGTTGG GGGGTGTAAT AACCAATGAC
CCAACGCAGC GTATCTCCCT GCAATCCTGG CGCTTTGTGC TGGCAACGGC GGGCGGAATG
CTTTCTACCG TACTGATGAT GCCTCTGGTG AAACTGATTG GCGGCGAGAA TAAGGCGCTG
GGCTTCCAGG GGGGTATCGC GGCGCTCTCG GTGGTGGCGT TCCTGATGCT GGCGTTCTGC
TTCTTTACCA CCAAAGAGCG CGTTGAAGCG CCTGCCACCC ATACCTCCAT GCGTGAAGAC
CTGCGTGATA TCTGGCACAA CGACCAGTGG CGCATAGTCG GCCTGCTCAC CATCCTGAAT
ATTCTGGCGG TATGCGTGCG CGGCGGGGCG ATGATGTATT ACGTCACCTG GATATTGGGC
AAACCAGGCG TGTTTGTCGC CTTCCTCACC ACCTATTGCG TCGGCAACCT GATTGGCTCG
GCGCTGGCAA AACCGTTGAC CGACTGGAAA TGCAAAGTGA GCGTTTTCTG GTGGACCAAT
GCTTTACTCG CAGTAATCAG CGTGGCGATG TTCTTCGTAC CGATGCACGC CACGATCGCT
ATGTTCGTCT TTATCTTTGT GATTGGCGTA TTGCACCAGT TAGTCACGCC TATCCAGTGG
GTGATGATGT CTGACACCGT CGACTACGGC GAATGGTGTA ACGGCAAACG CCTGACGGGG
ATCAGTTTTG CCGGCACGTT GTTCGTGCTG AAACTGGGTC TTGCCCTCGG CGGGGCGCTG
ATTGGCTGGA TGCTGGCAGG CGGCGGTTAC GACGCGGCGG CGAAAACGCA AAACAGCGCC
ACGATCAGCA TCATCATCGC TCTGTTCACT ATCGTTCCGG CCATCTGTTA TCTGCTGAGC
GCCGCGATCG CTAAACGCTA CTACACCCTG AAAAGCCCGT TCCTGAAAAC CATTCTGGAA
CAACTGGCGC AGGGCGCACA CCGCAACGAA CAAGAATTTA CCCATAAAGA ATTGCAAAAC
TAA
 
Protein sequence
MKSEILSVKE KIGYGMGDAA SHIIFDNVML YMMFFYTDIF GIPAGFVGTM FLLARALDAI 
SDPCMGLLAD RTRSRWGKFR PWVLFGALPF GIVCVLAYST PDLSLNGKMI YAAITYTLLT
LLYTVVNIPY CALGGVITND PTQRISLQSW RFVLATAGGM LSTVLMMPLV KLIGGENKAL
GFQGGIAALS VVAFLMLAFC FFTTKERVEA PATHTSMRED LRDIWHNDQW RIVGLLTILN
ILAVCVRGGA MMYYVTWILG KPGVFVAFLT TYCVGNLIGS ALAKPLTDWK CKVSVFWWTN
ALLAVISVAM FFVPMHATIA MFVFIFVIGV LHQLVTPIQW VMMSDTVDYG EWCNGKRLTG
ISFAGTLFVL KLGLALGGAL IGWMLAGGGY DAAAKTQNSA TISIIIALFT IVPAICYLLS
AAIAKRYYTL KSPFLKTILE QLAQGAHRNE QEFTHKELQN