| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3956 |
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| Symbol | ligB |
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| ID | 6795236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 3850523 |
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| End bp | 3852208 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642778075 |
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| Product | NAD-dependent DNA ligase LigB |
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| Protein accession | YP_002148670 |
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| Protein GI | 197247797 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTAT GGAAAAGTAT GGCGTGGGGA ATTTTATTGT GGCATTCGCA GAGTGGGGCG
CTTTGCCCGG CCTGGCCGCC AGCAAGGGCC GCTGAAGAAA TCGCCCGTTT ACAGCAACAG
CTCGCTGACT GGAATGACAT CTACTGGAAA CAAGGGGTTA GCGCGGTTGA CGATAGTGTG
TACGACCAAC TCAGCGCAAG ACTGGTTCAG TGGCAACGCT GTGTTGGTCA GGATGTTTCA
TCTACTCCGG TTTCACCGCC GTTAAACGGT ACAACAATGC ATCCTGTTGC GCATACGGGC
GTACGCAAAC TCGCGGACCG ACAGGCGGTA GAACAGTGGA TGCGCGGGCG CAGCGAGCTT
TGGGTACAGC CAAAAGTGGA TGGCGTAGCG GTAACGCTGG TTTATCAAAA CGGTAAACTG
ACCAGGGCTA TTAGCCGGGG TAACGGACTA CAAGGCGAGG ACTGGACGCC AAAAATTCGC
CTGATCCCCT CTATACCGCA GACAACACAA GGCGCGCTAG CTAACGCGGT GTTGCAGGGC
GAAATCTTTC TACAGCGCGA GGGGCATATC CAGCAACGGA TGGGCGGGAT GAATGCGCGC
TCGAAAGTCG CAGGAATGTT AATGCGCCAG GATAACGCCT CCGCGCTAAA TTCGTTGGGT
ATTTTTATTT GGGCGTGGCC GGACGGTCCG GCAAATATGC CCGAAAGATT AAGCCAACTT
GCTAAGGCTG GATTCAGTCT GACGAAGAAA TATTCCCTGG TGGTAAAAGA TGCCAGCGAG
GTCGAGCGGG CGCGCCAGTC ATGGCTGACG TCAGCGTTGC CCTTTGTGAC GGATGGCGTA
GTGATACGCA TGGCTAAAGA GCCCGCGTCA CAATACTGGC GACCCGGGCA GGGCGACTGG
CTGGCAGCAT GGAAATATCC GCCAGTAGCG CAGGTCGCGC AAGTGAGCGC TATTCAGTTC
TCGGTGGGGA AAAGCGGCAA AATTACCGTA GTAGCGTCGC TTGTCCCCGT TATATTGGAT
GATAAGCGGG TTCAGCGGGT CAATATCGGC TCTGTGAAAC GTTGGGAAGC GTGGGATATC
GCGCCGGGCG ATCAGATCCT GGTGAGTCTG GCCGGGCAAG GCATTCCCCG GCTTGATGAG
GTCGTCTGGC GGAGTCGTGA GCGGAGTAAA CCTGTACCGC CTGATAGCCA TTTCAACTCG
CTGACCTGCT TTTACGCGTC GGCAACGTGT CAGGAACAGT TTATCTCCAG GCTGGTATGG
CTGGGGTCAC GGTCGGCGTT GGGTCTGGAC GGAATGGGCG AAGCCAGCTG GCGGGCCTTG
CATCAGACGC ATCGCTTTGA GCATATCTTC TCCTGGCTTA CCCTGACGTC AGCGCAAATA
GCCAACACGC CAGGCTTTGC TAAAGGAAAA AGCGAGCAGA TATGGCGGCA ATTTAACCTG
GCGCGCCGGC AGTCGTTTAC CCGCTGGATC ATGGCGATGG ATATCCCCTT AACGCAGGCT
GCATTACAGG CCAGCGGCGA TCGTTCATGG GAGCAGTTAT TAATGCGAAC AGAGCAACAC
TGGCGGCAGT TACCAGCGAC GGGCGAGCGT CGTGCCGGGA GAGTCATCGA CTGGCGGAAT
AATCCGCAGA TCAAAACGCT GAGCAGATGG CTGGCTGCTC AGCATATTCC CGGATTTGGG
TCTTAG
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| Protein sequence | MRLWKSMAWG ILLWHSQSGA LCPAWPPARA AEEIARLQQQ LADWNDIYWK QGVSAVDDSV
YDQLSARLVQ WQRCVGQDVS STPVSPPLNG TTMHPVAHTG VRKLADRQAV EQWMRGRSEL
WVQPKVDGVA VTLVYQNGKL TRAISRGNGL QGEDWTPKIR LIPSIPQTTQ GALANAVLQG
EIFLQREGHI QQRMGGMNAR SKVAGMLMRQ DNASALNSLG IFIWAWPDGP ANMPERLSQL
AKAGFSLTKK YSLVVKDASE VERARQSWLT SALPFVTDGV VIRMAKEPAS QYWRPGQGDW
LAAWKYPPVA QVAQVSAIQF SVGKSGKITV VASLVPVILD DKRVQRVNIG SVKRWEAWDI
APGDQILVSL AGQGIPRLDE VVWRSRERSK PVPPDSHFNS LTCFYASATC QEQFISRLVW
LGSRSALGLD GMGEASWRAL HQTHRFEHIF SWLTLTSAQI ANTPGFAKGK SEQIWRQFNL
ARRQSFTRWI MAMDIPLTQA ALQASGDRSW EQLLMRTEQH WRQLPATGER RAGRVIDWRN
NPQIKTLSRW LAAQHIPGFG S
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