| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3939 |
|---|
| Symbol | |
|---|
| ID | 6795485 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3836105 |
|---|
| End bp | 3837229 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642778059 |
|---|
| Product | lipopolysaccharide core biosynthesis protein RfaG |
|---|
| Protein accession | YP_002148654 |
|---|
| Protein GI | 197250020 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTTG CCTTTTGCTT ATATAAATAT TTTCCTTTTG GCGGTCTGCA GCGTGATTTT
ATGCGCATTG CCCAAACCGT GGCGGCGCGA GGTCATCAGG TTCGTGTTTA TACTCAGTCA
TGGGAAGGGG AATGCCCGGA TAACTTTGAA TTAATCCGCG TGCCGGTTAA ATCCCGGACG
AACCACGGTC GTAACGCAGA ATATTATGCC TGGGTGCAAC ACCATTTGCG CGACCACCCT
GTCGATCGGG TGGTTGGATT CAATAAGATG CCGGGCCTTG ATGTGTATTA CGCCGCAGAC
GTGTGTTATG CCGAAAAAGT CGCCCAGGAA AAAGGATTTT TCTATCGCCT GACATCACGC
TATCGGCATT ATGCTGCTTT TGAACGCGCC ACGTTTGAAC ACGGCAAGCA GACACAACTA
TTAATGCTGA CGAATAAGCA GATTGCTGAC TTCCAAAAAC ATTATCAGAC TGAAGCGGAG
CGTTTCCATA TTCTTCCTCC GGGGATTTAC CCGGACAGAA AATATAGCCA ACAGATCCCG
AACAGTCGTC AAATTTATCG TCAGAAAAAT GGTATCTCAG AACAGCAAAA ATTACTGTTG
CAAGTAGGGT CTGACTTTAC CCGTAAAGGT GTGGATCGCT CTATTGAAGC GCTGGCATCG
CTACCCGAAT CTTTACGGCA AAATACGGTG CTCTATGTTG TCGGGCAGGA TAAGCCGAAG
AGGTTTGCAG CACTGGCTGA AAGAAGCGGC GTCGGCACGA ATGTGCATTT TTTCTCCGGA
CGTAATGATA TCGCGGAGTT AATGGCGGCA GCCGACCTTT TACTGCATCC AGCCTATCAG
GAAGCTGCAG GTATTGTTTT GCTGGAAGCC ATTACTGCTG GTTTGCCGGT GCTGACAACC
GCGGTGTGCG GTTATGCACA TTATATTGTG GATGCAAACT GTGGCGAAGC GATGACTGAA
CCATTCCGCC AGGATGCGCT AAATGAGGTT TTACTCAAAG CGCTGACACA GCCTTCCTTA
CGCAACGCCT GGGCTGAAAA TGCGCGGTAT TATGCTGATA CCCAGGATTT ATACAGCTTA
CCGGAGAAGG CCGCAGATAT TATTACAGGT GATTTAAATG GTTGA
|
|---|
| Protein sequence | MRVAFCLYKY FPFGGLQRDF MRIAQTVAAR GHQVRVYTQS WEGECPDNFE LIRVPVKSRT
NHGRNAEYYA WVQHHLRDHP VDRVVGFNKM PGLDVYYAAD VCYAEKVAQE KGFFYRLTSR
YRHYAAFERA TFEHGKQTQL LMLTNKQIAD FQKHYQTEAE RFHILPPGIY PDRKYSQQIP
NSRQIYRQKN GISEQQKLLL QVGSDFTRKG VDRSIEALAS LPESLRQNTV LYVVGQDKPK
RFAALAERSG VGTNVHFFSG RNDIAELMAA ADLLLHPAYQ EAAGIVLLEA ITAGLPVLTT
AVCGYAHYIV DANCGEAMTE PFRQDALNEV LLKALTQPSL RNAWAENARY YADTQDLYSL
PEKAADIITG DLNG
|
|---|
| |