| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3910 |
|---|
| Symbol | |
|---|
| ID | 6795357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | + |
|---|
| Start bp | 3807122 |
|---|
| End bp | 3807898 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642778030 |
|---|
| Product | DNA-binding transcriptional repressor LldR |
|---|
| Protein accession | YP_002148625 |
|---|
| Protein GI | 197248048 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGTGA TGCCCAGACG ACTGTCAGAC GAGATTGCCT CTCGCGTGCG GGCGCTGATT
GAAGAACAGC AGTTGGAGGC GGGCATGAAA TTGCCCGCTG AGCGCCAGTT GGCCGTACAG
CTCGGCGTGT CGCGCAACTC GCTGCGCGAG GCGTTAGCAA AGCTGGTGAG TGAAGGCGTG
TTGATCAGCC GTCGCGGCGG CGGGACGTTT GTTCGCTGGC AGCATGAAGC CTGGTCTGAA
CAAAACATCG TTCAGCCGCT GAAGACCCTG CTGGCGGACG ATCCTGATTA CAGCTTCGAT
ATTCTGGAAG CCCGCCACGC CATTGAAGCC AGTACGGCCT GGCACGCCGC CATGCGTGCC
ACCGCTGCCG ACAAAGAGAA AATCAGACTC TGCTTTGATG CGACGCTCAG CGAAGACCCG
GATCTCGCCT CCCAGGCCGA CGTGCGATTT CATCTGGCGA TCGCGGAAGC CTCGCACAAT
GTGGTGCTGT TGCAAACCAT GCGCGGTTTC TTCGACGTCC TGCAATCCTC CGTCAAACAG
AGTCGCCAGC GTATGTATCT CGTTCCGCCC GTATTCTCAA AGCTGACGGA ACAACACCAG
GCGGTGATGG ACGCCATTCT GGACGGTAAC GCCGAGGGCG CGCGTAAAGC GATGATGGCG
CACCTCAGTT TTGTCCACAC TACGATTAAA CGATTTGATG AAGACCAGGC CCGCCAGGCG
CGTATTACCC GCCTGCCCGG CGACCATAAT GAGATGACCA GGGAGAATAA ATCATGA
|
|---|
| Protein sequence | MIVMPRRLSD EIASRVRALI EEQQLEAGMK LPAERQLAVQ LGVSRNSLRE ALAKLVSEGV
LISRRGGGTF VRWQHEAWSE QNIVQPLKTL LADDPDYSFD ILEARHAIEA STAWHAAMRA
TAADKEKIRL CFDATLSEDP DLASQADVRF HLAIAEASHN VVLLQTMRGF FDVLQSSVKQ
SRQRMYLVPP VFSKLTEQHQ AVMDAILDGN AEGARKAMMA HLSFVHTTIK RFDEDQARQA
RITRLPGDHN EMTRENKS
|
|---|
| |