Gene SeAg_B3885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3885 
Symbol 
ID6795230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand+ 
Start bp3776022 
End bp3776495 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content47% 
IMG OID642778005 
Product2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM 
Protein accessionYP_002148600 
Protein GI197251722 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGGG TACTTGAGGG CATACTTGCG GTATTAATTG CCGTACTTTC CTGCATTGTA 
TTTATTAACG TTATTTTACG TTACGGTTTT GAGAGCAGTA TTTTGTCGGT AGATGAACTA 
TCACGTTATC TATTTGTATG GCTGACGTTT ATTGGCGCCA TCGTTGCATT TATGGATAAC 
GCTCACGTTC AGGTCACTTT TGTGGTGGAA AAACTTTCGC CAGCGAATCA GCGTCGTCTC 
TCGCTGCTGA CGCATTCGCT AATTTTATTG TTATGCCTCG CATTAGGCTG GGGCAGCCTG 
CAAAAAGCGT TGCAGGACTG GAGCGATCAC TCGCCAATCC TCGGTTTACC GATCGGCCTG 
ATGTATATCG CCTGTCTGCC CACAAGCGTT GCCATCGCGT TAATCGAGCT GCGTCGGCTT 
TATCACTTAA TAACGCGTAA CGATTCCTTT CAACAACCAC AGCAAGGAGC CTAA
 
Protein sequence
MKRVLEGILA VLIAVLSCIV FINVILRYGF ESSILSVDEL SRYLFVWLTF IGAIVAFMDN 
AHVQVTFVVE KLSPANQRRL SLLTHSLILL LCLALGWGSL QKALQDWSDH SPILGLPIGL 
MYIACLPTSV AIALIELRRL YHLITRNDSF QQPQQGA