| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3874 |
|---|
| Symbol | xylB |
|---|
| ID | 6796874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3762726 |
|---|
| End bp | 3764180 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642777994 |
|---|
| Product | xylulokinase |
|---|
| Protein accession | YP_002148589 |
|---|
| Protein GI | 197248425 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATATCG GGATCGATCT TGGTACATCG GGTGTAAAAG CTATCCTGTT GAATGAGCAG
GGCGATGTGC TGGCTACGCA TACTGAAAAA CTGACCGTAT TGCGTCCGCA TCCCTTATGG
TCGGAGCAGG AACCAGAGCA GTGGTGGCAG GCGACGGATC GTGCGGTTAA AGGTTTAGGT
CGGCAACAGT CGTTAAGTGG CGTCCGGGCG TTGGGCATCG CCGGACAAAT GCATGGCGCG
ACATTGCTTG ATAGCCGTCA GCAGGTTCTG CGACCAGCGA TTTTATGGAA TGACGGACGC
TGTAGCGAAG AGTGCGCCTG GCTGGAAAAA CAGGTGCCGC AGTCGCGTGC GATAACCGGT
AATCTGATGA TGCCCGGTTT TACCGCGCCC AAATTAGTCT GGGTGCAGCG CCACGAACCG
GATATTTTCC GCCAGATAGA CAAAGTTCTG CTGCCGAAAG ATTTTCTGCG GCTGCGAATG
ACGGGCGTCT TTGCCAGCGA TATGTCGGAT GCGGCAGGAA CGATGTGGCT GGACGTGAAA
AAGCGCGACT GGAGCGACGT TATGCTCAAC GCCTGTCATT TAACCCGACA GCAGATGCCA
GCGTTATTTG AAGGTAGTGA CATTACCGGA ACGTTGCTGC CAGAGGTAGC CAGCGCATGG
GGAATGCCAG CAGTACCTGT GGTGGCGGGC GGCGGCGACA ATGCGGCTGG CGCGGTCGGC
GTAGGAATGA TCGATGCCGG ACAGGCGATG CTCTCACTCG GAACATCGGG CGTCTATTTT
GCCGTCAGCG ACGGCTTTCT GAGTAAACCG GAGAGCGCAG TACACAGTTT TTGCCATGCG
CTGCCGGAAC GCTGGCATTT AATGTCTGTA ATGTTGAGCG CCGCCTCTTG TCTGGACTGG
GCGGCTAAAC TCACCGGGCA GAAGAACGTC CCGACACTGA TTGCCGCCGC GCAGCTGGCG
GATGAGCATA CCGATCCGAT CTGGTTTTTG CCGTACCTGT CCGGCGAGCG CACGCCGCAC
AATAATCCGC AGGCAAAAGG CGTTTTCTTT GGTTTAACCC ATCAGCATGG CCCGGCGGAA
CTGGCGCGGG CGGTACTGGA AGGCGTGGGA TATGCTCTGG CGGATGGCAT GGATGTGGTT
CACGCCTGCG GCGTCAAACC CGCCAGCGTG ACGCTTATCG GCGGCGGGGC GCGCAGCGAA
TACTGGCGTC AGATGCTATC TGATATTAGC GGGCTACAGC TTGATTATCG TACTGGCGGC
GATGTGGGGC CAGCGCTGGG CGCGGCGCGT CTGGCGCAAA TTGCGGTGAA TAAACAGACT
CCGCTCGCCG ATGTATTGCC GCAGTTGCCG CTGGAGCAGG CGCATTATCC CGATGCGCAG
CGTCATGCGG TTTATCAACA ACGTCGTGAA ACCTTCCGTC GACTCTATCA GCAGCTGTTG
CCGTTGATGT CATAA
|
|---|
| Protein sequence | MYIGIDLGTS GVKAILLNEQ GDVLATHTEK LTVLRPHPLW SEQEPEQWWQ ATDRAVKGLG
RQQSLSGVRA LGIAGQMHGA TLLDSRQQVL RPAILWNDGR CSEECAWLEK QVPQSRAITG
NLMMPGFTAP KLVWVQRHEP DIFRQIDKVL LPKDFLRLRM TGVFASDMSD AAGTMWLDVK
KRDWSDVMLN ACHLTRQQMP ALFEGSDITG TLLPEVASAW GMPAVPVVAG GGDNAAGAVG
VGMIDAGQAM LSLGTSGVYF AVSDGFLSKP ESAVHSFCHA LPERWHLMSV MLSAASCLDW
AAKLTGQKNV PTLIAAAQLA DEHTDPIWFL PYLSGERTPH NNPQAKGVFF GLTHQHGPAE
LARAVLEGVG YALADGMDVV HACGVKPASV TLIGGGARSE YWRQMLSDIS GLQLDYRTGG
DVGPALGAAR LAQIAVNKQT PLADVLPQLP LEQAHYPDAQ RHAVYQQRRE TFRRLYQQLL
PLMS
|
|---|
| |