| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3851 |
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| Symbol | |
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| ID | 6794847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 3741510 |
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| End bp | 3744038 |
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| Gene Length | 2529 bp |
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| Protein Length | 842 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642777972 |
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| Product | outer membrane usher protein FimD |
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| Protein accession | YP_002148567 |
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| Protein GI | 197251067 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACATGGA CGCATCTTCC TCTGGGCAAT AAGACCTCGC GTTTCACGCA GTCTGCGCTT
GCGCTGATGA TAGCGAGTAC GCTCCCCGCG TATGCGGGAA CATTTAACCC GCGCTTTCTG
GAGGATGTGC CGGGTATTGA TCAGCACGTT GACCTTTCAA TGTATGAATC CAATAAAGCT
GAACACCTGC CAGGTAAATA CCGCGTCTCG GTGGTGGTCA ACGAAAAAAA AATGGAGTCT
CGCACCCTGG AGTTTAAGGC AGCGACAGAG GCGCAGCGCG CAAAAATGGG TGAATCCCTG
GTGCCGTGCT TAAGCCGCGT GCAGCTTGAA GATATGGGCG TGCGTATTGA TAGCTTCCCG
GCGCTGAAAA TGGCCCCGCC TGAAGCCTGT GTTGCTTTTG ACGACATTAT TCCCCAGGCC
GCCAGCCATT TCGACTTTGC AGACCAGACC CTGATCATGA GCTTCCCGCA GGCTGCGATG
AAGCAGACAG CGCGCGGTAC GGTGCCAGAA TCGCAGTGGG ACGAAGGGGT GAATGCCCTG
CTGGTGGATT ATAACTTCTC CGGCAGCAAC GCCAGCTATG ACGCGCACGA CAGTGAGACC
AACTACAACA GCGACAGCTA CTATCTGAAC CTGCGCAGCG GTATGAACCT GGGGGCATGG
CGATTACGTA ACTATAGTAC CTGGACGCGA AACGACGGTA ACAACACATG GGATAACATT
GGCACATCCC TAAGCCGTGC CATTGTGCCG CTGAAATCAC AGCTGACGTT GGGGGATACC
TCCACCGCCG GTGATATTTT TGACAGCGTT CAGATGCGCG GGGTGCAGTT AACTTCTGAC
GAAGAGATGC TGCCTGACAG CCAGCGCGGG TTTGCGCCCG TCATCCGGGG TATTGCCAAA
AGTAACGCCG AAGTCACCGT TGAGCAGAAC AACTACGTTA TTTACCGTAC GTTTGTTCAG
CCGGGTGCGT TTGAAATTAA CGACCTGTAT CCAACCTCAA ACAGCGGCGA CCTGACGGTC
ACCATTAAAG AATCGGACGG CAGTGAGCAG AAGTTCGTTC AGCCGTTCTC CTCGGTGGCG
CTCCTCCAGC GTGAAGGCCA TCTCAAGTAC AGCCTTTCCG CCGGGGAATA CCGTGCCGGG
AACTATAACA GCGCCGAGCC GAAATTCGGG CAGCTTGATG CCATGTACGG CCTGCCGTAT
GGCTTTACCG TTTATGGTGG TGCGATCTTC TCTGACGACT ATTACTCGCT GGCGGGAGGA
TTAGGTAAAA ACTTCGGTTA TATCGGCGCG ATCTCCATCG ATGTAACCCA GGCAAAAAGC
AAGCTGGCAA ATGAGGAGAA TTCGGAAGGT CAGTCTTATC GTTTCCTCTA CTCCAAGAGC
TTTAACAGCG GTACCGATTT CCGTCTGCTG GGTTACAAGT ATTCGACCAG CGGCTATTAC
ACCTTCCAGG AAGCGACGGA TGTGCGCAGC GATGCGGACA GCTCTTATAG CCAGTATCAC
AAACGTAGTC AGATTCAGGG CAACGTAACG CAGCAACTGG GCGCCTGGGG CTCGGTCTAT
TTTAACGTCA CGCAGCAGGA CTACTGGAAT GATGAAGGTA AACAGCGTTC GCTGAATGCC
GGTTATAACG GCCGTATTGG CCGCGTGAAC TACAGCATTG CTTACACCTG GACGAAAAGC
CCCGAGTGGG ATGAGAGCGA TCGTTTACTG TCATTCTCCA TGTCGATTCC ACTGGGACGC
GTGTGGAGTA ACTACCACCT CACGACCGAT CAGCATGGCC GAACCAACCA GCAGTTGGGT
GTGAGCGGCA CCGCGCTGGA AGACCACAAC CTGAACTATA GCGTACAGGA AGGCTACGGC
AGCAACGGCG TGGGTAACAG CGGCAGCGTG AACCTGGATT ACCAGGGCGG CGTGGGTAGC
GCCAGCCTGG GTTACAACTA CAACCGTGAC GGCCAGCAGG TGAACTACGG TTTGCGCGGC
GGTGTGATAG CCCATAGCGA AGGCATCACT CTTTCTCAAC CTCTGGGTGA ATCTATGGCC
ATTATCTCCG CGCCGGGCGC GCGCGGCGCG CACGTGATCA ACAACGGTGG TGTGGAAGTG
GACTGGATGG GTAATGCGGT CGTGCCTTAT CTCACTCCGT ACCGTGAAAC GGAAGTCTCA
CTGCGAAGCG ACAGCCTGAA CAACCAGGTT GACCTGGATA CCGCCTCCGT CAACGTAGTG
CCGACGCGCG GCGCGATTGT TCGTGCCCGC TTCGATACCC GAGTGGGCTA TCGCGTGCTG
ATGAACCTGA CGCAGGCCAA TGGCAAAGCG GTGCCGTTTG GTGCTACCGC CACGCTGCTG
GATACCACAA AAGAGTCCAG CAGTATCGTG GGTGAAGACG GTCAGCTTTA TATCAGCGGG
ATGCCGGAGA AAGGTGCCCT TCAGGTGAAC TGGGGTAAAG ACCAGGCACA GCAATGCCGC
GTGGCGTTTA CGCTGCCGGA ACAACAGGAT AATACCGGCG TGGTGATGGC GAATGCCGTC
TGCCGGTAA
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| Protein sequence | MTWTHLPLGN KTSRFTQSAL ALMIASTLPA YAGTFNPRFL EDVPGIDQHV DLSMYESNKA
EHLPGKYRVS VVVNEKKMES RTLEFKAATE AQRAKMGESL VPCLSRVQLE DMGVRIDSFP
ALKMAPPEAC VAFDDIIPQA ASHFDFADQT LIMSFPQAAM KQTARGTVPE SQWDEGVNAL
LVDYNFSGSN ASYDAHDSET NYNSDSYYLN LRSGMNLGAW RLRNYSTWTR NDGNNTWDNI
GTSLSRAIVP LKSQLTLGDT STAGDIFDSV QMRGVQLTSD EEMLPDSQRG FAPVIRGIAK
SNAEVTVEQN NYVIYRTFVQ PGAFEINDLY PTSNSGDLTV TIKESDGSEQ KFVQPFSSVA
LLQREGHLKY SLSAGEYRAG NYNSAEPKFG QLDAMYGLPY GFTVYGGAIF SDDYYSLAGG
LGKNFGYIGA ISIDVTQAKS KLANEENSEG QSYRFLYSKS FNSGTDFRLL GYKYSTSGYY
TFQEATDVRS DADSSYSQYH KRSQIQGNVT QQLGAWGSVY FNVTQQDYWN DEGKQRSLNA
GYNGRIGRVN YSIAYTWTKS PEWDESDRLL SFSMSIPLGR VWSNYHLTTD QHGRTNQQLG
VSGTALEDHN LNYSVQEGYG SNGVGNSGSV NLDYQGGVGS ASLGYNYNRD GQQVNYGLRG
GVIAHSEGIT LSQPLGESMA IISAPGARGA HVINNGGVEV DWMGNAVVPY LTPYRETEVS
LRSDSLNNQV DLDTASVNVV PTRGAIVRAR FDTRVGYRVL MNLTQANGKA VPFGATATLL
DTTKESSSIV GEDGQLYISG MPEKGALQVN WGKDQAQQCR VAFTLPEQQD NTGVVMANAV
CR
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