| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3850 |
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| Symbol | |
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| ID | 6796930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | - |
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| Start bp | 3740428 |
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| End bp | 3741492 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642777971 |
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| Product | protein LpfD |
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| Protein accession | YP_002148566 |
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| Protein GI | 197248291 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3539] P pilus assembly protein, pilin FimA |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGAAAA AGTTGATGAT GTTTGCGGGC CTGCTGGGCG GGTCGGTGCT GTTTTCTGGC
CAGGCGCTGG CGGCAGCGGA TTGGGGGGCG TGTACGCCTG ACGGCGGGAC TCATGTTTTT
TCGGCCACGC TGAACAAAAC CATCACCGAT ACGTCCAAGA ATGCCTCAGG TATTGTTTTC
CGTGATTTTT GGTCGTGGGA TTTAGGGGGG GATTACGATG CTGTTTGTGA ATGTCCAGAG
GGGACTGCTA CGGCATCGAC ATATTATAAA GCTACTTCCC CCCTCGCTCC TGGCCACAGC
GAAGGCGAAC GCCAATATTT TATTATCAAT AATAATATCC AGATTTCAGT CGATGTTTGG
GTTCAGGGAC ACTATCAGGA TTATAAAACA GCGCCATTTT CTAATTTAGA TAATCTGTCC
GCCGCCAGAG CAGGCTGCAC TGTGGGTGAT GTACGGTTTA CAACAGGAAG CAAAGGAAAA
TTATCTCTTT ATATTAATCA CCCATTTGTC GGTGAACTGC AAATACCGAG TACAAAGATA
CTGGACTTGT TTGGAACCCA CAAAGTAGAC GTTTATAATG CCAGTCCGTT GGCATCCGTA
TATTTAAGTG GGAGCATCAT TGTTCCACAG GGCTGTGAGC TCTCCAGCGG CAGCACGCTG
GAAATTCCGT TTGGGGAATT TAAGGCCACT GATTTTAAAG ATCGCAAAGG ACAAGTTGCA
AAGAACGCCA CGAAATTCAC CAAAGAGCTG CAGTTTAAAT GCACCAATAT TTCCGATGGC
GTAAAGATCT TCCTGCGTAT TGAGGGAATG CCAAACGCTA ATGATTCGAA TGCCATCGAC
ATGGGCAACC CGGATATCGG TGCCATCATT GAGGGTGCTA ACGGTAAAAT TTTGGTGCCA
AATGACGCCA GTGTTAATCA GGAGCTGAGC GTATCGGGTC TTGTTGACGA CACGCACCGT
ACCGCCTCAA CGACCATTTC GGCTTACCCC ATCAGTACCA CCGGCAAATT GCCGGCCGCC
GGGGATTTCG AGGGAATTGC CACCATGCGT ATTGATGTGG AGTAA
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| Protein sequence | MLKKLMMFAG LLGGSVLFSG QALAAADWGA CTPDGGTHVF SATLNKTITD TSKNASGIVF
RDFWSWDLGG DYDAVCECPE GTATASTYYK ATSPLAPGHS EGERQYFIIN NNIQISVDVW
VQGHYQDYKT APFSNLDNLS AARAGCTVGD VRFTTGSKGK LSLYINHPFV GELQIPSTKI
LDLFGTHKVD VYNASPLASV YLSGSIIVPQ GCELSSGSTL EIPFGEFKAT DFKDRKGQVA
KNATKFTKEL QFKCTNISDG VKIFLRIEGM PNANDSNAID MGNPDIGAII EGANGKILVP
NDASVNQELS VSGLVDDTHR TASTTISAYP ISTTGKLPAA GDFEGIATMR IDVE
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