Gene SeAg_B3839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3839 
SymboldppD 
ID6793226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp3728597 
End bp3729580 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content56% 
IMG OID642777961 
Productdipeptide transporter ATP-binding subunit 
Protein accessionYP_002148557 
Protein GI197249575 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGTTAT TAAATGTAGA TCAATTATCG GTGCACTTCG GCGATGAAGG GACACCGTTC 
AAAGCCGTCG ACCGCATTAG CTACAGCGTG AAGCAGGGTG AGGTGGTCGG TATTGTCGGC 
GAGTCTGGTT CCGGCAAATC CGTCAGCTCG CTGGCGATTA TGGGGCTTAT CGATTACCCA 
GGCCGCGTGA TGGCGGAAAA CCTGCTCTTT AACGGACAGG ATCTGAAGCG CATTTCCGAG 
AAGGAACGTC GCAACCTGGT GGGCGCTGAA GTGGCGATGA TTTTCCAGGA CCCGATGACC 
AGCCTCAATC CTTGCTATAC CGTTGGCTTT CAGATTATGG AAGCCATCAA GGTACATCAG 
GGCGGGAACA AGAAAACCCG TCGTCAGCGA GCGATTGACC TGTTGAACCA GGTGGGTATT 
CCCGATCCGG CTTCTCGTCT GGATGTCTAT CCGCACCAGC TTTCTGGCGG CATGAGTCAG 
CGCGTGATGA TTGCGATGGC AATAGCCTGT CGACCAAAGC TGTTAATTGC TGATGAACCG 
ACCACGGCGC TGGATGTGAC CATTCAGGCG CAAATCATTG AGCTGCTGCT GGAGTTGCAG 
CAAAAAGAGA ACATGGCGCT GGTGCTGATT ACCCATGACC TGGCGCTGGT GGCGGAAGCG 
GCGCACAAAA TTATCGTCAT GTACGCCGGG CAGGTCGTCG AAACAGGCGC TGCGCAGGAT 
ATTTTCCGCG CGCCGCGTCA TCCGTATACC CAGGCATTGC TACGTGCGTT ACCAGAGTTT 
GCGCAAGATA AAGCGCGTCT GGCGTCGCTG CCGGGCGTGG TGCCGGGGAA ATATGACCGA 
CCGACGGGTT GTCTGCTTAA CCCTCGCTGC CCCTACGCCA CGGACAGATG TCGTGCGGAA 
GAACCTGCTC TCAACCAACT GGACGATGGA CGTCAGTCAA AATGTCATTA CCCACTCGAT 
GATGCCGGGA GGCCCACACT ATGA
 
Protein sequence
MALLNVDQLS VHFGDEGTPF KAVDRISYSV KQGEVVGIVG ESGSGKSVSS LAIMGLIDYP 
GRVMAENLLF NGQDLKRISE KERRNLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ 
GGNKKTRRQR AIDLLNQVGI PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP 
TTALDVTIQA QIIELLLELQ QKENMALVLI THDLALVAEA AHKIIVMYAG QVVETGAAQD 
IFRAPRHPYT QALLRALPEF AQDKARLASL PGVVPGKYDR PTGCLLNPRC PYATDRCRAE 
EPALNQLDDG RQSKCHYPLD DAGRPTL