Gene SeAg_B3838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3838 
SymboldppF 
ID6795437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand- 
Start bp3727587 
End bp3728600 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content57% 
IMG OID642777960 
Productdipeptide transporter ATP-binding subunit 
Protein accessionYP_002148556 
Protein GI197247738 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTACGC ATGAGGCCAC CTTGCAACAG CCGCTGTTGC GGGCTATCGA CCTGAAAAAA 
CACTATCCGG TGAAGAAGGG GATCTTTTCT CCGGAACGGC TGGTAAAAGC GCTGGACGGC 
GTGTCGTTTA ATCTCGAACG CGGTAAAACG CTGGCCGTAG TGGGGGAGTC CGGTTGTGGA 
AAATCCACAC TGGGTCGCCT GCTGACGATG ATTGAAACGC CAACCGGCGG CGAGCTTTAT 
TACCAGGGGC AGGATCTGCT CAAACACGAT CCGCACGCGC AGAAACTGCG GCGGCAGAAA 
ATTCAGATTG TGTTTCAGAA CCCCTACGGT TCCCTGAACC CACGCAAGAA AGTGGGGCAA 
ATTCTGGAAG AGCCGTTGCT GATCAATACC AGCCTGAGTA AAGCGCAGCG TCGTGAAAAA 
GCGCTGGCGA TGATGGCGAA GGTGGGGCTG AAAACCGAGC ACTACGACCG CTATCCGCAT 
ATGTTCTCCG GTGGCCAGCG TCAGCGTATC GCTATCGCCC GCGGTCTGAT GCTTGATCCG 
GACGTAGTGA TTGCCGACGA ACCGGTTTCC GCGCTCGACG TGTCGGTGCG CGCTCAGGTG 
CTGAACCTGA TGATGGATTT GCAACAGGAT ATGGGGCTGT CTTATGTCTT TATCTCGCAC 
GACCTGTCGG TGGTGGAACA CATCGCCGAT GAAGTGATGG TCATGTACTT AGGCCGCTGC 
GTGGAGAAAG GGACCAAAGA GCAGATTTTT AACAATCCAC GTCATCCCTA TACCCAGGCG 
TTGCTCTCCG CCACGCCGCG GCTGAATCCG GACGATCGCC GTGAGCGGAT TAAGCTGACC 
GGCGAGTTGC CGAGCCCGCT GAACCCGCCG CCGGGCTGCG CCTTCAACGC CCGCTGCAGC 
CGTCGCTTCG GACCCTGTAC GCAGTTACAG CCGCAGCTTA AAGAGTACGA CGGCCAGTTG 
GTGGCCTGCT TTGCCGTCGA TCAGGATGAA AACCCGCAGA AGCCGCTGAG TTAA
 
Protein sequence
MSTHEATLQQ PLLRAIDLKK HYPVKKGIFS PERLVKALDG VSFNLERGKT LAVVGESGCG 
KSTLGRLLTM IETPTGGELY YQGQDLLKHD PHAQKLRRQK IQIVFQNPYG SLNPRKKVGQ 
ILEEPLLINT SLSKAQRREK ALAMMAKVGL KTEHYDRYPH MFSGGQRQRI AIARGLMLDP 
DVVIADEPVS ALDVSVRAQV LNLMMDLQQD MGLSYVFISH DLSVVEHIAD EVMVMYLGRC 
VEKGTKEQIF NNPRHPYTQA LLSATPRLNP DDRRERIKLT GELPSPLNPP PGCAFNARCS 
RRFGPCTQLQ PQLKEYDGQL VACFAVDQDE NPQKPLS