Gene SeAg_B3823 details

Gene Information

• Locus tag: SeAg_B3823
• ID: 6792658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 3708982
• End bp: 3710988
• Gene Length: 2007 bp
• Protein Length: 668 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642777947
• Product: putative phosphodiesterase
• Protein accession: YP_002148543
• Protein GI: 197249305
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2199] FOG: GGDEF domain; [COG2200] FOG: EAL domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGCGTCA GCCGCTCGTT AACAATTAAA CAGATGGCAA TGGTTGCGGC CGTTGTCATG 
GTGTTTGTTT TTGTCTTTTG CACCGTTTTG TTGTTCCATC TGGTACAGCA GAACCGCTAC 
AACACGGCTA CGCAACTGGA AAGTATCGCG CGATCTGTTC GGGAACCTCT TTCTTCCGCG 
ATTCTAAAAG CGGATCTCCC CGGCGCGGAA ACCATTCTGG AAAGTATTAA ACCTGCGGGC 
GTGGTGAGTC GCGCCGATGT GGTATTGCCG AATCAGTTCC AGGCGTTGCG TAAGCGCTTC 
ATTCCTGAAC GCCCCGTCCC GGTTATGGTG ACGCGTCTCT TCGAACTGCC GGTACAAATT 
TCTTTGCCGG TTTATTCGCT GGAGCGTCCC GCCAATCCGC AACCGCTGGC CTACCTTGTA 
TTGCAGGCGG ATTCGTACCG TATGTACAAG TTCGTCATGA GCGCGCTCTC TACGTTAGTG 
ACCATTTACT TACTTTTATC GCTGATCCTG ACGGTGGCCA TCGCCTGGTG CGTAAACCGC 
CTGATTGTGC ATCCGCTGCG CAAAATCGCC CGCGAGCTGA ACGACATTCC GCAGCAGGAG 
CTGATCGGAC ATCAGCTGGC GTTGCCGCGT CTGCATCAGG ATGATGAAAT TGGGATGCTG 
GTGCGCAGCT ATAACCTCAA CCAGCAGCTT ATGCAGCGTC AACGCGAGGA GCAAACGGAC 
AACGCGATGC GTTTTCCGGT TTCCGAGCTG CCCAATAAAG CCTTTTTAAT GGCGCTGCTG 
GAACAGGTTA TCACCCGCCA ACAGACCACC GCGCTTATCA TCGTGACGTG CGAAACGTTG 
CGTGACACGG CAGGCGTGCT GCAAGAAACG CAGCGGGAGA TTCTATTACT GACGCTGGTT 
GAGAAGCTGA AGTCGGTGCT GGCGCCGCGC ATGGTGCTTA CGCAGGTCAG CGGGTATGAC 
TTCGCCATTA TCGCCCACGG CGTTAAAGAG CCGTGGCACG CCATTACATT AGGTCAGCAA 
ATACTCACTA TCATTAATGA ACGACTGCCC ATTCAGGGTA TTCAACTGCG CCCAAGCTGC 
AGTATTGGCA TTGCGATGTA TTATGGCGAT CTGACCGCCG AAGAGCTCTA TAGCCGCGCC 
GTCTCCGCCG CGTTTACCGC GCGCCGAAAA GGTAAAAATC AGATCCAGTT CTTTGACCCG 
ACGCAGATGG AGGCCGCTCA ACAGCGCCTT ACCGAAGAGA GCGATATCCT TACCGCGCTG 
GATAACCATC AGTTTGCCAT TTGGCTGCAG CCGCAGGTCG AGATGCGCAG CGGCAACGTA 
TTAAGCGCCG AAGCCTTGTT ACGTATGCAA CAGCCGGACG GTAGCTGGGA ATTACCAGAT 
GGGCTGATTG AGCGCATTGA ATCCTGCGGC CTGATGGTCA CGGTGGGCCA TTGGGTGCTG 
GAAGAGTCCT GTCGCCAGCT TGCTGCCTGG CAGGAGCGCG GCGTGACATT GCCGCTCTCC 
GTCAATCTTT CCGCGTTACA GCTCATGCAC CCTGGCATGG TGTCGGAGCT GCTGGAATTG 
TTAAACCGCT ATCGTATTCA ACCAGGTACG CTGATTCTTG AGGTCACTGA AAGCCGCCGT 
ATCGACGATC CGCACGCTGC CGTCGCTATC TTACGTCCGT TACGTAATGC TGGCGTGCGT 
ATCGCACTGG ATGATTTTGG CATGGGTTAC GCGGGGCTGC GCCAGTTACA GCATATGAAG 
TCGCTACCGG TCGATATCCT TAAAATTGAT AAAATGTTTG TCGATGGGTT ACCAGATGAT 
CACAGTATGG TGACGGCGAT TATTCTGATG GCCCGCAGTC TTAATTTACA ATTGATTGCC 
GAGGGCGTGG AGAACGAGGC GCAACGCGCG TGGCTGGAAC AGGCGGGAGT CAACGTCGCG 
CAAGGCTTCC TGTTTGCTCG GCCCGTTCCC GCGGATATCT TTGAAGAACG GTATCTGTCG 
CACGAAAATC CTGATTACAA AAGTTAA 

 

Protein sequence

MRVSRSLTIK QMAMVAAVVM VFVFVFCTVL LFHLVQQNRY NTATQLESIA RSVREPLSSA 
ILKADLPGAE TILESIKPAG VVSRADVVLP NQFQALRKRF IPERPVPVMV TRLFELPVQI 
SLPVYSLERP ANPQPLAYLV LQADSYRMYK FVMSALSTLV TIYLLLSLIL TVAIAWCVNR 
LIVHPLRKIA RELNDIPQQE LIGHQLALPR LHQDDEIGML VRSYNLNQQL MQRQREEQTD 
NAMRFPVSEL PNKAFLMALL EQVITRQQTT ALIIVTCETL RDTAGVLQET QREILLLTLV 
EKLKSVLAPR MVLTQVSGYD FAIIAHGVKE PWHAITLGQQ ILTIINERLP IQGIQLRPSC 
SIGIAMYYGD LTAEELYSRA VSAAFTARRK GKNQIQFFDP TQMEAAQQRL TEESDILTAL 
DNHQFAIWLQ PQVEMRSGNV LSAEALLRMQ QPDGSWELPD GLIERIESCG LMVTVGHWVL 
EESCRQLAAW QERGVTLPLS VNLSALQLMH PGMVSELLEL LNRYRIQPGT LILEVTESRR 
IDDPHAAVAI LRPLRNAGVR IALDDFGMGY AGLRQLQHMK SLPVDILKID KMFVDGLPDD 
HSMVTAIILM ARSLNLQLIA EGVENEAQRA WLEQAGVNVA QGFLFARPVP ADIFEERYLS 
HENPDYKS