Gene SeAg_B3770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3770 
SymbolrpoH 
ID6795506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp3653193 
End bp3654047 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content54% 
IMG OID642777895 
ProductRNA polymerase factor sigma-32 
Protein accessionYP_002148491 
Protein GI197250526 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAG AAATGCAAAA TTTAGCTTTA GCCCCTGTTG GCAACCTGGA ATCTTATATC 
CGGGCGGCGA ACGCGTGGCC GATGTTATCG GCTGACGAGG AGCGGGCATT GGCTGAAAGG
CTGCATTACC AGGGCGATCT GGAAGCAGCT AAAACGCTGA TCCTGTCTCA CCTGCGCTTT
GTTGTTCATA TTGCTCGTAA CTATGCGGGC TATGGTCTGC CGCAGGCGGA TTTGATCCAG
GAAGGCAACA TCGGCCTGAT GAAAGCCGTA CGTCGTTTTA ACCCGGAAGT AGGCGTGCGC
CTGGTTTCCT TCGCCGTACA CTGGATTAAA GCAGAAATTC ACGAATACGT GCTGCGTAAC
TGGCGTATCG TTAAAGTCGC AACCACGAAA GCGCAGCGTA AGCTGTTCTT TAATCTGCGT
AAAACCAAGC AGCGTCTGGG CTGGTTTAAT CAGGATGAGG TTGAAATGGT GGCGCGCGAA
CTGGGTGTTT CCAGTAAAGA CGTGCGTGAG ATGGAGTCGC GTATGGCGGC GCAGGACATG
ACGTTTGACA TGTCTTCGGA CGATGAGTCC GACAGCCAGC CAATGGCGCC GGTGCTGTAT
CTGCAGGATA AATCGTCTAA CTTTGCCGAC GGCATTGAAG ACGATAACTG GGAAGAGCAG
GCCGCCAACC GACTGACCGA CGCGATGCAG GGGCTCGACG AGCGTAGCCA GGATATTATC
CGCGCTCGCT GGCTGGACGA AGACAATAAG TCTACGTTGC AGGAGCTGGC CGATCGTTAC
GGCGTCTCCG CTGAGCGTGT GCGCCAGCTT GAAAAGAACG CCATGAAAAA GCTTCGCGCT
GCGATCGAAG CGTAA
 
Protein sequence
MTKEMQNLAL APVGNLESYI RAANAWPMLS ADEERALAER LHYQGDLEAA KTLILSHLRF 
VVHIARNYAG YGLPQADLIQ EGNIGLMKAV RRFNPEVGVR LVSFAVHWIK AEIHEYVLRN
WRIVKVATTK AQRKLFFNLR KTKQRLGWFN QDEVEMVARE LGVSSKDVRE MESRMAAQDM
TFDMSSDDES DSQPMAPVLY LQDKSSNFAD GIEDDNWEEQ AANRLTDAMQ GLDERSQDII
RARWLDEDNK STLQELADRY GVSAERVRQL EKNAMKKLRA AIEA