| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3723 |
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| Symbol | |
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| ID | 6796043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011149 |
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| Strand | + |
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| Start bp | 3602482 |
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| End bp | 3604065 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642777849 |
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| Product | transcriptional regulatory protein RtcR |
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| Protein accession | YP_002148445 |
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| Protein GI | 197250791 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG4650] Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAAAAA CGGTGGCCTT TGGTTTTGTC GGTACGGTAC TCGACTATGC AGGACGCGGC
AGTCAACGTT GGGAAAAATG GCGCCCCACT TTGTGTCTGT GTCAGCAGGA GACGCTGGTC
GTTCACCGCC TGGAACTGCT GTACGATGCC CGCTCTCGCT CGCTGTTTGA AGGATTAAAG
AAGGATATCG CCAGCGTCTC GCCGGAAACG GAAGTCGTCG GCGTAGAAAT CGCGATCCGC
AACCCGTGGG ACTTCGAAGA GGTTTATGCC TGCCTGCACG ATTTCGCCCG CAGCCATACC
TTTCATCCCG AAGATGAAGA CTATCTGATT CATATCACCA CCGGCACTCA CGTCGCGCAG
ATCTGCTGGT TCCTGCTGGC GGAGGCGCGC TATCTACCGG CGCGATTAGC GCAGACCTCG
CCGCCGCGCA AAAAAGATAA ACCACATAGC ACGGGCGACG TGACGATTAT TGACCTCGAC
CTCAGCCGCT ACAATGACAT CGCTACCCGC TTCGCCCAGG AGCGGGAGGA GACGCTCAAC
TTCCTGAAGT CCGGCATTGC AACCCGCAAC CCGTGTTTCA ACCGGATGAT TGAGCAAATT
GAGCGCGTCG CGATACGCTC CCGTTCGCCA ATCCTGCTCA ACGGCCCGAC CGGCGCGGGC
AAGTCGTTTC TCGCCCGTCG CATCTATGAA CTAAAACTGG CCCGCCACCA GTTCAGCGGC
CCGTTTGTCG AAGTGAACTG CGCCACCCTG CGCGGCGACA CGGCGATGTC GGCGCTGTTC
GGCCACGTTA AGGGGGCGTT TACCGGCGCG AGAGAGGAGC GTGCAGGACT GCTGCGCAGC
GCCGACGGCG GCATGTTGTT TCTTGACGAA GTGGGAGAGC TGGGCGCGGA TGAACAGGCC
ATGTTGCTGA AAGCCATTGA AGAGAAACGC TTTTACCCTT TCGGCAGCGA CCAGCAGGTC
AGCAGCGATT TCCAGTTGAT TGCCGGCACG GTGCGCGACC TGCGCCAGCG GGTGGCGGAG
GGGACATTCC GCGAAGACCT GTATGCGCGC ATTAATCTCT GGACCTTCGA ACTACCGGGC
CTGCGTCAGC GCCAGGAAGA TATTGAGCCA AACCTTGACT ACGAACTGGA GCGCCACGCG
GCGCTAACCG GCGACAGCGT GCGTTTTAAT ACCGAAGCGC GCCGCGCCTG GCTGAGCTTC
GCCACCTCGC CGCAGGCCGC CTGGCGCGGT AACTTCCGCG AACTCTCCGC CAGCGTCACC
CGCATGGCGA CGCTGGCGGA CAACGGGCGA ATCACGATCG AAACGGTAGA CGATGAAATC
GCGCGTTTGC GCTATAGCTG GAATGATCAT CGCCCCTCCG CGCTCGACGG ACTGCCGGGC
ATTGACGCAA CGGCGCTGGA TCTGTTTGAC CGTATGCAAC TGGAAAACGT CGTTGCCGTC
TGCCGCCAGG CGAAAACCCT TTCCGACGCC GGGCGGCAGC TATTCAACGT TTCCCGTCAG
GGGAAAGCCA CGGTGAATGA CGCTGACCGG CTGCGTAAAT ACCTGGCGCG TTTTGGTCTG
ACGTGGGACG TTTTACAGAA TTAA
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| Protein sequence | MRKTVAFGFV GTVLDYAGRG SQRWEKWRPT LCLCQQETLV VHRLELLYDA RSRSLFEGLK
KDIASVSPET EVVGVEIAIR NPWDFEEVYA CLHDFARSHT FHPEDEDYLI HITTGTHVAQ
ICWFLLAEAR YLPARLAQTS PPRKKDKPHS TGDVTIIDLD LSRYNDIATR FAQEREETLN
FLKSGIATRN PCFNRMIEQI ERVAIRSRSP ILLNGPTGAG KSFLARRIYE LKLARHQFSG
PFVEVNCATL RGDTAMSALF GHVKGAFTGA REERAGLLRS ADGGMLFLDE VGELGADEQA
MLLKAIEEKR FYPFGSDQQV SSDFQLIAGT VRDLRQRVAE GTFREDLYAR INLWTFELPG
LRQRQEDIEP NLDYELERHA ALTGDSVRFN TEARRAWLSF ATSPQAAWRG NFRELSASVT
RMATLADNGR ITIETVDDEI ARLRYSWNDH RPSALDGLPG IDATALDLFD RMQLENVVAV
CRQAKTLSDA GRQLFNVSRQ GKATVNDADR LRKYLARFGL TWDVLQN
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