| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeAg_B3624 |
|---|
| Symbol | rplE |
|---|
| ID | 6792967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Agona str. SL483 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011149 |
|---|
| Strand | - |
|---|
| Start bp | 3506174 |
|---|
| End bp | 3506713 |
|---|
| Gene Length | 540 bp |
|---|
| Protein Length | 179 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642777751 |
|---|
| Product | 50S ribosomal protein L5 |
|---|
| Protein accession | YP_002148347 |
|---|
| Protein GI | 197248113 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000960301 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATTA CTACAAAGAC GAAGTAGTTA ACAAACTCAT GACTGAGTTT
AACTACAATT CTGTCATGCA AGTCCCTCGG GTCGAGAAGA TCACCCTGAA CATGGGTGTT
GGTGAAGCGA TCGCTGACAA GAAACTGCTG GATAACGCAG CAGCAGACCT GACAGCAATC
TCCGGTCAAA AACCGTTGAT CACCAAAGCA CGCAAATCTG TTGCAGGCTT CAAAATCCGT
CAGGGCTATC CGATCGGCTG TAAAGTAACT CTGCGTGGCG AACGCATGTG GGAGTTCTTT
GAGCGCCTGA TCACTATTGC TGTTCCTCGT ATCCGTGACT TCCGTGGCTT GTCCGCTAAG
TCATTCGACG GTCGTGGTAA CTACAGCATG GGTGTCCGTG AGCAGATCAT CTTCCCAGAA
ATCGACTACG ATAAAGTCGA CCGCGTTCGT GGTTTGGATA TTACCATTAC CACTACTGCG
AAATCTGACG AAGAAGGCCG TGCTCTGCTG GCTGCCTTTG ACTTCCCGTT CCGCAAGTAA
|
|---|
| Protein sequence | MAKLHDYYKD EVVNKLMTEF NYNSVMQVPR VEKITLNMGV GEAIADKKLL DNAAADLTAI
SGQKPLITKA RKSVAGFKIR QGYPIGCKVT LRGERMWEFF ERLITIAVPR IRDFRGLSAK
SFDGRGNYSM GVREQIIFPE IDYDKVDRVR GLDITITTTA KSDEEGRALL AAFDFPFRK
|
|---|
| |