Gene SeAg_B3621 details

Gene Information

• Locus tag: SeAg_B3621
• Symbol: rplF
• ID: 6797354
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 3504882
• End bp: 3505415
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642777748
• Product: 50S ribosomal protein L6
• Protein accession: YP_002148344
• Protein GI: 197248381
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.000291027
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTG TTGCTAAAGC ACCGGTCGTT GTTCCTGCCG GCGTTGATGT CAAAATCAAC 
GGTCAGGTTA TTACGATCAA AGGTAAAAAC GGCGAGCTGA CTCGTACTCT CAACGATGCT 
GTTGAAGTTA AACATGCAGA TAATGCACTG ACCTTCGGTC CGCGTGATGG TTACGCAGAC 
GGTTGGGCAC AGGCTGGTAC CGCGCGTGCC CTGCTGAACT CAATGGTTAT CGGTGTTACC 
GAAGGCTTCA CTAAGAAGCT GCAGCTGGTT GGTGTAGGTT ATCGTGCAGC GGTTAAAGGG 
AATGTAGTAA ACCTGTCTTT AGGTTTCTCT CACCCGGTTG ACCATCAGCT GCCGGCAGGT 
ATCACTGCTG AATGTCCGAC TCAAACTGAA ATCGTGCTGA AAGGCGCTGA TAAGCAGGTG 
ATCGGCCAGG TTGCAGCAGA TCTGCGCGCC TACCGTCGTC CTGAGCCTTA CAAAGGCAAG 
GGTGTTCGTT ACGCCGACGA AGTCGTGCGT ACCAAAGAGG CTAAGAAGAA GTAA 

 

Protein sequence

MSRVAKAPVV VPAGVDVKIN GQVITIKGKN GELTRTLNDA VEVKHADNAL TFGPRDGYAD 
GWAQAGTARA LLNSMVIGVT EGFTKKLQLV GVGYRAAVKG NVVNLSLGFS HPVDHQLPAG 
ITAECPTQTE IVLKGADKQV IGQVAADLRA YRRPEPYKGK GVRYADEVVR TKEAKKK