Gene SeAg_B3602 details

Gene Information

• Locus tag: SeAg_B3602
• Symbol: def
• ID: 6793455
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 3492950
• End bp: 3493459
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642777731
• Product: peptide deformylase
• Protein accession: YP_002148327
• Protein GI: 197248664
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.0167703
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAGTTT TGCAAGTGTT ACATATTCCG GACGAGCGCC TTCGCAAAGT CGCAAAGCCG 
GTTGAAGAAG TGAATGCAGA AATTCAGCGT ATCGTCGATG ATATGTTCGA AACGATGTAC 
GCGGAAGAAG GTATCGGTCT GGCCGCAACG CAGGTCGATA TCCACCAGCG GATCATCGTG 
ATTGACGTTT CGGAAAACCG CGACGAGCGC CTGGTACTCA TTAACCCGGA ATTGCTGGAG 
AAAAGTGGCG AAACGGGTAT AGAAGAAGGC TGTCTGTCGA TTCCGGAACA GCGCGCTTTA 
GTGCCGCGCG CCGAGAAAGT GAAAATCCGC GCGCTGGATC GCGACGGCAA CCCGTTTGAG 
CTTGAAGCGG ATGGTTTGCT GGCAATTTGC ATTCAGCATG AGATGGATCA TCTGGTCGGT 
AAACTGTTTA TCGATTATTT GTCGCCGCTG AAGCAACAAC GTATTCGTCA GAAAGTAGAA 
AAACTCGACC GCCTGAACGC CCGGGCTTAA 

 

Protein sequence

MSVLQVLHIP DERLRKVAKP VEEVNAEIQR IVDDMFETMY AEEGIGLAAT QVDIHQRIIV 
IDVSENRDER LVLINPELLE KSGETGIEEG CLSIPEQRAL VPRAEKVKIR ALDRDGNPFE 
LEADGLLAIC IQHEMDHLVG KLFIDYLSPL KQQRIRQKVE KLDRLNARA