Gene SeAg_B3563 details

Gene Information

• Locus tag: SeAg_B3563
• Symbol: mreD
• ID: 6793834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: -
• Start bp: 3458209
• End bp: 3458700
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 642777694
• Product: rod shape-determining protein MreD
• Protein accession: YP_002148296
• Protein GI: 197250214
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2891] Cell shape-determining protein
• TIGRFAM ID: [TIGR03426] rod shape-determining protein MreD

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.003884
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTGGCGA GCTATCGTAG CCAGGGGCGC TGGGTTATCT GGCTCTCGTT TCTTATTGCG 
CTGTTGCTGC AAATCATGCC TTGGCCGGAC GACATCATTG TTTTCCGGCC AAACTGGGTT 
TTGCTTATCT TACTGTACTG GATTCTGGCC CTGCCGCACC GCGTAAATGT GGGGACGGGA 
TTTGTGATGG GTGCCATACT TGATCTCATC AGCGGTTCCA CACTTGGCGT GCGCGCTCTG 
TCGATGAGTA TTGTCGCCTA TCTGGTCGAT CTGAAATTCC AGCTCTTCCG TAACCTGGCG 
CTCTGGCAGC AGGCGCTGGT GGTAATGTTG CTTTCACTGG CCGTGGACAT TATTGTTTTC 
TGGGCCGAGT TTTTAGTGAT CAACGTCTCT TTCAGACCGG AAGTGTTCTG GAGTAGTGTA 
GTCAATGGCG TGCTGTGGCC CTGGCTCTTT TTGCTGATGC GTAAAGTACG CCAGCAGTTT 
GCTGTGCAAT AA 

 

Protein sequence

MVASYRSQGR WVIWLSFLIA LLLQIMPWPD DIIVFRPNWV LLILLYWILA LPHRVNVGTG 
FVMGAILDLI SGSTLGVRAL SMSIVAYLVD LKFQLFRNLA LWQQALVVML LSLAVDIIVF 
WAEFLVINVS FRPEVFWSSV VNGVLWPWLF LLMRKVRQQF AVQ