Gene SeAg_B3525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeAg_B3525 
Symbol 
ID6795978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Agona str. SL483 
KingdomBacteria 
Replicon accessionNC_011149 
Strand
Start bp3420290 
End bp3421570 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content55% 
IMG OID642777656 
Productcytosine deaminase 
Protein accessionYP_002148258 
Protein GI197247592 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0402] Cytosine deaminase and related metal-dependent hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACA ATAACATCAC TATTCGTCAG ACGCGTCTGC AGGGACACGA AGGATTATGG 
CAGATTACGA TTGAAAACGG GCGCTTTAGC CGGATTGAGC CTCAGGAAGC CGCATCGTTA
CCGCAGGGCG AAGTGCTTGA TGCCGAAGGC GGCCTGGCTA TTCCACCGTT TGTTGAGCCA
CATATCCACC TGGATACCAC GCAAACGGCG GGTGAACCGA GCTGGAACCA GTCCGGCACA
CTGTTTGAAG GGATTGAGCG CTGGGCAGAA CGTAAAGCAA TGCTCACGCA TGAAGATGTG
AAAGCGCGCG CGATGCAGAC CCTGAAATGG CAGATGGCTA ACGGCATCCA GTACGTTCGT
ACTCACGTTG ACGTTTCAGA TCCTACGCTC ACCGCGCTGA AAGCCATGCT GGAAGTGAAG
CAAGAGGTTG CGCCGTGGGT AGATCTGCAA ATCGTCGCCT TTCCGCAAGA AGGTATTCTG
TCTTATCCCA ACGGTGAAGC GCTGTTAGAG GAAGCCGTGC GTTTGGGCGC TGACGTTATT
GGCGCCATTC CGCACTTTGA GTTCACGCGG GAATATGGCG TTGAATCGCT GCACAAAATC
TTTGCACTGG CGCAGAAATA CGATCGCTTG ATCGATGTGC ACTGCGACGA AATTGATGAC
GAGCAGTCTC GCTTTGTCGA AACGGTCGCG GCGCTGGCGC ATCGTGATGG CATGGGGGCG
CGCGTGACCG CCAGCCACAC CACGGCTATG CACTCGTACA ACGGCGCGTA TGCGTCACGC
CTGTTCCGCC TGTTGAAAAT GTCGGGGATT AACTTCGTCG CCAACCCGCT GGTGAATATT
CATCTGCAAG GGCGGTTTGA CACTTACCCG AAACGTCGTG GCGTCACGCG AGTGAAAGAG
ATGCTGGAAG CGGGGATCAA CGTCTGCTTT GGCCATGATG ACGTCTTCGA CCCGTGGTAT
CCATTAGGCA CAGCAAATAT GCTGCAGGTG TTGCATATGG GGTTACACGT TTGCCAGTTG
ATGGGGTATG GGCAAATCAA CGACGGGTTA AATCTGATCA CTACCCACAG CGCAAAAACC
CTGCATTTAC AGGACTACGG TCTGAGCGTC GGCAATGCCG CGAATCTGGT TATCTTACCC
GCTGAGAATG GATTCGATGC GGTACGTCGC CAGACGCCTG CCCGTTACTC GATTCGCCAC
GGGCGGGTGA TTGCCGAGAC GGTGCCGAGC CAGACGACGC TGCACCTGAC CCAGCCGGAA
GCCGTGACGT TTAAGCGTTA A
 
Protein sequence
MQNNNITIRQ TRLQGHEGLW QITIENGRFS RIEPQEAASL PQGEVLDAEG GLAIPPFVEP 
HIHLDTTQTA GEPSWNQSGT LFEGIERWAE RKAMLTHEDV KARAMQTLKW QMANGIQYVR
THVDVSDPTL TALKAMLEVK QEVAPWVDLQ IVAFPQEGIL SYPNGEALLE EAVRLGADVI
GAIPHFEFTR EYGVESLHKI FALAQKYDRL IDVHCDEIDD EQSRFVETVA ALAHRDGMGA
RVTASHTTAM HSYNGAYASR LFRLLKMSGI NFVANPLVNI HLQGRFDTYP KRRGVTRVKE
MLEAGINVCF GHDDVFDPWY PLGTANMLQV LHMGLHVCQL MGYGQINDGL NLITTHSAKT
LHLQDYGLSV GNAANLVILP AENGFDAVRR QTPARYSIRH GRVIAETVPS QTTLHLTQPE
AVTFKR