Gene SeAg_B3506 details

Gene Information

• Locus tag: SeAg_B3506
• Symbol: kdsC
• ID: 6796953
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 3399180
• End bp: 3399746
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 642777639
• Product: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
• Protein accession: YP_002148241
• Protein GI: 197249283
• COG category: [R] General function prediction only
• COG ID: [COG1778] Low specificity phosphatase (HAD superfamily)
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAAAG CAGGTGCGTC GCTTGCGACC TGTTATGGCC CCGTCAGCAC TCATGTCATG 
ACCAAAGCGG AGAATATCCG CCTGCTCATC CTGGACGTGG ATGGCGTATT GTCTGACGGC 
CTGATTTATA TGGGCAATAA CGGCGAAGAG CTGAAGGCTT TCAACGTTCG TGACGGCTAT 
GGTATTCGCT GTGCTTTGAC CTCCAATATC GAGGTTGCCA TTATTACCGG ACGAAAGGCT 
AAACTTGTAG AAGATCGCTG CGCCACGCTG GGGATTGTCC ATCTTTATCA GGGACAGTCG 
AATAAGCTGA TCGCCTTTAG CGATCTGCTG GAAAAACTGG CCATTGCGCC GGAAAATGTT 
GCCTATGTCG GCGATGATCT GATTGACTGG CCGGTGATGG AAAAAGTGGG GTTAAGCGTT 
GCCGTTGCGA ATGCGCATCC GCTGCTGATC CCCCGCGCTG ACTATGTGAC GCACATTGCC 
GGCGGGCGCG GCGCGGTACG TGAGGTGTGC GATTTGCTGC TGCTGGCGCA GGGCAAGCTG 
GATGAGGCCA AAGGGCAATC GATATGA 

 

Protein sequence

MSKAGASLAT CYGPVSTHVM TKAENIRLLI LDVDGVLSDG LIYMGNNGEE LKAFNVRDGY 
GIRCALTSNI EVAIITGRKA KLVEDRCATL GIVHLYQGQS NKLIAFSDLL EKLAIAPENV 
AYVGDDLIDW PVMEKVGLSV AVANAHPLLI PRADYVTHIA GGRGAVREVC DLLLLAQGKL 
DEAKGQSI