Gene SeAg_B3505 details

Gene Information

• Locus tag: SeAg_B3505
• Symbol: kdsD
• ID: 6793633
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Agona str. SL483
• Kingdom: Bacteria
• Replicon accession: NC_011149
• Strand: +
• Start bp: 3398173
• End bp: 3399159
• Gene Length: 987 bp
• Protein Length: 328 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 642777638
• Product: D-arabinose 5-phosphate isomerase
• Protein accession: YP_002148240
• Protein GI: 197250012
• COG category: [M] Cell wall/membrane/envelope biogenesis; [T] Signal transduction mechanisms
• COG ID: [COG0794] Predicted sugar phosphate isomerase involved in capsule formation; [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains
• TIGRFAM ID: [TIGR00393] KpsF/GutQ family protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCATT TAGCGTTGCA ACCGGGGTTT GACTTTCAGC AGGCAGGCAA AGAGGTCCTG 
GAAATTGAAC GTGAAGGCCT GGCGGAGCTT GATCAATATA TCAACCAGCA TTTCACGCTG 
GCCTGTGAAA AAATGTTCAA CTGCACCGGA AAAGTGGTGG TCATGGGGAT GGGAAAATCC 
GGTCATATCG GACGGAAAAT GGCCGCCACG TTCGCCAGTA CCGGCACCTC TTCCTTTTTT 
GTACATCCAG GCGAAGCCGC GCACGGCGAT TTGGGGATGG TTACGCCGCA GGATGTGGTT 
ATCGCTATCT CCAACTCCGG CGAATCCAGC GAGATCGCGG CGCTAATACC GGTGCTTAAA 
CGGCTGCACG TACCGTTAAT TTGCATTACC GGGCGACCGG AAAGCAGCAT GGCGCGTGCG 
GCAGATGTGC ATCTGTGTGT TAAAGTGCCC AAAGAAGCGT GTCCGTTAGG CCTGGCGCCT 
ACCACTAGTA CCACCGCAAC GCTGGTGATG GGCGACGCTC TCGCCGTGGC GTTGTTAAAA 
GCGCGCGGCT TTACCGCCGA GGATTTCGCT CTATCGCATC CTGGCGGCGC GCTGGGACGT 
AAGCTACTGC TGCGCGTAAG CGATATTATG CATACTGGCG ATGAAATCCC GCATGTTAAT 
AAACATGCCA CCCTGCGTGA TGCGCTGTTA GAAATTACGC GTAAAAATCT CGGTATGACC 
GTCATTTGCG ATGAATCCAT GAAGATCGAC GGTATCTTCA CCGACGGCGA TTTACGTCGC 
GTGTTCGATA TGGGCGGCGA TATGCGCCAG TTGGGGATCG CCGAGGTGAT GACGCCAGGG 
GGCATTCGCG TGCGTCCCGG TATTCTCGCT GTCGATGCGC TGAATTTAAT GCAGTCCCGC 
CATATCACCT CCGTACTGGT TGCTGATGGC GACCAGTTAC TCGGTGTGTT ACATATGCAT 
GATCTCCTGC GTGCAGGCGT CGTGTAG 

 

Protein sequence

MSHLALQPGF DFQQAGKEVL EIEREGLAEL DQYINQHFTL ACEKMFNCTG KVVVMGMGKS 
GHIGRKMAAT FASTGTSSFF VHPGEAAHGD LGMVTPQDVV IAISNSGESS EIAALIPVLK 
RLHVPLICIT GRPESSMARA ADVHLCVKVP KEACPLGLAP TTSTTATLVM GDALAVALLK 
ARGFTAEDFA LSHPGGALGR KLLLRVSDIM HTGDEIPHVN KHATLRDALL EITRKNLGMT 
VICDESMKID GIFTDGDLRR VFDMGGDMRQ LGIAEVMTPG GIRVRPGILA VDALNLMQSR 
HITSVLVADG DQLLGVLHMH DLLRAGVV